Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1198 ATGGGGTGTTTCACTGTACTGAAGAGCAAGAAGAAAAAGTCTGATAAGATAGTGCATGTAAAACGCGTAAGCCATAATGACAATGTACCAACAGCGCTGCCTGAACCTCATACCCGCTCACTCCAATCTGCACCTCCTAGTTTTAGGACGAGAGTGAAACCAATTCAACCGATCAAAAAAGTCAATAACAATAGAACGCGGGCATTATCTGCTCCATCGACTCTTGATGCAGCAGAACAAGATGTGTTGGCCTCAGTTGAGTATGAGGGACATGAAGAGCCAAAGCACCGAACCACATCAATGAAGGAGCAGCATTCGTCTAGTCCACAACCTTTACCTCTTCCTTCACCTCAGGGCGGTACGGCTTTGAAGGCTATGGGTAGCTTTAAGTCTGTGACAGCTAGTGGTCCTCTATCTGCTTCTGGACCTTTGCCGCTTCCACCCACTGGTTCACTTCGGAACTTTCAGTATGACGAAATCGCTGCTGCTTGCCTTAATTTCTCTTCAGATCGATGCATGTCAGAATGTCTTTCTTCCACTATATATAAAGCTTCCTTTGGTGATGACGTTTCAAGTTCAAAGAAGTTTGAAGCCACTGTAACGCGCCTTCACCCATCAACTCAGGGGTTGAAGGAATTCATGAACGAGATTTATACTCTTGCATCTTTGCAACATCCAAATCTCTGTAAATTGCTAGGATTTCATGCACGCGATGGTTCAGAGCAGAGAATGTTGGTGTATGAAAGGCTATACCATGGAAGCTTGGACCGGTTGTTGTATGGGAGATCTGATGGCCCATCAATTGATTGGAATACAAGAATGAAAATTGCTATGTGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTTTCAACAACCAACATACAAATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCGAGCAGTTCTTCTGCTGTTGGAAACTTATCAATGGAGACACTGGAAAAAGGAATGCTTACTCCAAAGAGCAACGTATGGAGTTTCGGAATTTTTCTTCTGGAGCTACTTACTGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAACTTAGTGAAGTGGAGCCGGCCTTTCCTAGCCGACGATTATCGGCTCTCTTTGATCATGGACCCTCAACTTAAAGGTCGCTTTCCGGCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAAAGGCCTACCATGAGAACTGTTGTTAAGCATCTCAAAACGATCCAAGCTGTTAAGTACTCGTGCCGGTTCCCATTACAGGAGCCAGCAGCATTCTCTGGTAAACACATGTCAAGATCACCAAGTCTTAATGGTATCATCTGCCCCGCACCTAGGTCGAGTTTCTCGCCGTCCCCGCCATCAGGAGCACTAGTTTCAATTTCACCGCCAAGATGGTCAGGAGTGCCGATAGTCCCTCCTCCACGAGCTAGTTTGGAGGAGCTTGATAGACAAGAAAGCAGAAAGTCATGA 1581 0.4516 MGCFTVLKSKKKKSDKIVHVKRVSHNDNVPTALPEPHTRSLQSAPPSFRTRVKPIQPIKKVNNNRTRALSAPSTLDAAEQDVLASVEYEGHEEPKHRTTSMKEQHSSSPQPLPLPSPQGGTALKAMGSFKSVTASGPLSASGPLPLPPTGSLRNFQYDEIAAACLNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSTQGLKEFMNEIYTLASLQHPNLCKLLGFHARDGSEQRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAQGLTFLHEEGPFQAMYNEFSTTNIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPAKAARTIADIAQRCLQKEPSERPTMRTVVKHLKTIQAVKYSCRFPLQEPAAFSGKHMSRSPSLNGIICPAPRSSFSPSPPSGALVSISPPRWSGVPIVPPPRASLEELDRQESRKS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1198 526 MobiDBLite consensus disorder prediction 31 49 - -
Lan13g1198 526 MobiDBLite consensus disorder prediction 23 53 - -
Lan13g1198 526 PANTHER OS01G0588500 PROTEIN-RELATED 43 526 - -
Lan13g1198 526 MobiDBLite consensus disorder prediction 505 526 - -
Lan13g1198 526 MobiDBLite consensus disorder prediction 88 102 - -
Lan13g1198 526 ProSiteProfiles Protein kinase domain profile. 167 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1198 526 PANTHER OS01G0822200 PROTEIN 43 526 - -
Lan13g1198 526 SUPERFAMILY Protein kinase-like (PK-like) 145 452 IPR011009 -
Lan13g1198 526 Gene3D Transferase(Phosphotransferase) domain 1 250 454 - -
Lan13g1198 526 Gene3D Phosphorylase Kinase; domain 1 148 248 - -
Lan13g1198 526 MobiDBLite consensus disorder prediction 88 123 - -
Lan13g1198 526 Pfam Protein tyrosine and serine/threonine kinase 181 442 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1198 Lan-Chr13 17604508 17608446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1198 139 448 Receptor kinase-like Gene Family AT4G02010 37.778 8.59e-57 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lan13g1198 PK_Tyr_Ser-Thr 5.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1198 - - gmx:100809117 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1421 7 19702440 19706458 Lan13g1198 13 17604508 17608446 LSH
Lan11g1650 11 32130113 32134039 Lan13g1198 13 17604508 17608446 LSH
Lan13g1198 13 17604508 17608446 Lan12g0177 12 2566117 2569155 PCT
Lan12g0177 12 2566117 2569155 Lan13g1198 13 17604508 17608446 PCT