Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1195 ATGTATAAGGGGAGATTTGAAGGGTGCAATGGTGGTGGATATGTTGAAACTGATCCATCTGGTCGATATGGGCGTTTCAGGGAAGTTCTAGGTAGAGGAGCAACAAAGACAGTGTATAAAGCATTTGATGAGGTGTTAGGAATTGAAGTGGCTTGGAACCAAGTACATCTTGGTAATGTTTCTCATTCACCAGAACAACTTCAACGTCTTTATTCAGAAGTTCATCTTCTCAAGCACCTTGATCATGAATCTATGATGATCTTCTATGGTTCTTGGATTGATATCATTTGCAGAACATTCAACTTCATTACTGAATTGTTCACCTCTGGAACACTTAGAGAGTATAGGCAAAAGTATAAGAGAGTAGATATGAGAGCATTGAAGAATTGGTCTCGTCAGATTCTAAGTGGATTGGAGTATTTACACAGCAATGATCCTCTTATAATACATAGAGACCTAAAGTGTGATAATATATTTGTGAATGGCCATATTGGGCAGGTTAAGATTGGTGACTTAGGCTTGGCAGCAATACTTCGTAGCTCCCCACTTGCCCTAAGTGTCTTAGGTACACCAGAGTTCATGGCACCAGAGTTGTATGAAGAAAAATACAATGAGCTTGTAGATATATATTCATTTGGGATGTGTATGATAGAGATGCTTACTTTTGAGTTCCCATATAGTGAGTGTTCCAACGCAGCTCAAATATACAAGAAAGTTACTTCGGGAAAGCTACCAGATGCTTTTTACAGAATAAAAGATATAGAAGCTCATAATTTCGTGGCAAAATGTTTGGCAAATGTTTCAATGAGGCCTTCAGCAAAGGAGCTTTTGATGGACCCATTTTTAGCCACGGATCAACTTCAATTATCATTACTAACCCAACCATTATTCATAAATCAAACTATAGTACTCAATTCCAATGAAGCTGTTAATATTTCATTGGATAATCAAAAAATGAGCAATGATATGATGACAATCACTGGGTCCATAAATAAAGAGGATAATATATTGTTCCTTAAAGTTCAGATATCCGACAAAAATGGGCATACAAGAAATGTATTCTTTCCATTTGACACTATACAAGACACTCCTATTGAGGTAGCCATGGAGATGGTTAAAGAACTTTCTATTAGTCACTTGGAACCTTCTGAGATTGCTTCAATGATAGATCATGAGATATCAACTTTAGTTTCAACTTGGAGGGATGGGAGTACTAATTATCACAATCAACTACAACATAGCTTTAACTATGAAGAATATGAGGATATTAATAACCATCATCCTTTCTACTTTTCATCTTGTTCTTCTTCCCTTCATGCTTCTCTATCTTTCCCCATGTCTAAATCCTTCTACAATACCCACTTTTGTGGCCACAACTACCCATTTCCTCATGAATGGGCTCAAGATGATCAATCTATGAATGAAGATACAAGTTGTCTAAGCTCAATGAACTCTTTCAAGTGTATCAATTTCAAATACTGCAATGAAGATGAGCATGGCCTAACATTAGCACTAGATGGAGGATCTGAACATAACAAGTGCACAAGATCATTAACAAAACAATTTTGTAACACAATATCAAAGCAACTTCAACAGTCTCTATTATGCAAGAGAAGGATGTTCAACATAGTTGAGGCCATTGAGAACATTGGGTTCAATCATCCACAAAAAGATTGA 1677 0.3655 MYKGRFEGCNGGGYVETDPSGRYGRFREVLGRGATKTVYKAFDEVLGIEVAWNQVHLGNVSHSPEQLQRLYSEVHLLKHLDHESMMIFYGSWIDIICRTFNFITELFTSGTLREYRQKYKRVDMRALKNWSRQILSGLEYLHSNDPLIIHRDLKCDNIFVNGHIGQVKIGDLGLAAILRSSPLALSVLGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECSNAAQIYKKVTSGKLPDAFYRIKDIEAHNFVAKCLANVSMRPSAKELLMDPFLATDQLQLSLLTQPLFINQTIVLNSNEAVNISLDNQKMSNDMMTITGSINKEDNILFLKVQISDKNGHTRNVFFPFDTIQDTPIEVAMEMVKELSISHLEPSEIASMIDHEISTLVSTWRDGSTNYHNQLQHSFNYEEYEDINNHHPFYFSSCSSSLHASLSFPMSKSFYNTHFCGHNYPFPHEWAQDDQSMNEDTSCLSSMNSFKCINFKYCNEDEHGLTLALDGGSEHNKCTRSLTKQFCNTISKQLQQSLLCKRRMFNIVEAIENIGFNHPQKD* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1195 558 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1195 558 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 517 - -
Lan13g1195 558 CDD STKc_WNK 22 282 - -
Lan13g1195 558 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Lan13g1195 558 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1195 558 Gene3D Transferase(Phosphotransferase) domain 1 107 289 - -
Lan13g1195 558 Gene3D Phosphorylase Kinase; domain 1 12 105 - -
Lan13g1195 558 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1195 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lan13g1195 558 PANTHER WNK KINASE 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1195 Lan-Chr13 17575323 17580324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1195 13 422 MAP Kinase Kinase Kinase AT3G51630 64.439 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan13g1195 Pkinase 6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1195 K08867 - gmx:100272206 717.613