Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1193 ATGAGAAAAGATTCACACAACAACACCCTAAGAGGAGAAGAAACAGAGTCAAAGAACAGCACCATTTTGTTCGGGAAATACAAGATTCACAAGTTGTTAGGAGTTGGAGCATCAGCAAAGGTTTACCATGCTACAAACATAGACACAGGGAAAAGTGTAGCTGTTAAGGTTGTCAACAAAAACAAGGCTATGAAGAGTGGTTTCAAAACCAACATCGAACGTGAAATCTCTATCATGCACAAACTTGACCATCACCCAAATATAGTAAAGATCTTTGAAGTCCTTGCAACCAAGTCAAAGATTTACATTGTCATGGAATTTGTATCCGGTGGTGAACTCTTTCAAGAGGTTTCAACTGAAGGACATTTCAGTGAAGATCTCAGTAGAAAATATTTCCAGCAACTTATCTCAGCCGTGAAGTTTTGCCACTCCAATGGTGTCTTCCACCGTGATCTTAAACTTGATAACCTCTTAATCGATGAGAATAAAGACCTAAAAGTTACTGATTTTGGGTTAAGTGCTGTTAAGGATTCAACTCAACTCAACAATGATGGGTTGCTTAAAACTATTTGTGGAACACCTGCATATGTTGCACCAGAGATTCTCTCAAAGAAAGGTTATGATGGAGCTAAGGTTGATGTTTGGTCTTGTGGTGTTGTTTTGTTTGCACTTTCTGTTGGGTATTTACCATTCAATGATTATAATATTACTGTCTTGTATAGAAAGATTTATAGAGGCCAGTTTCGTTTACCAAAAGGGTTATTATCTCATGGTTTGAGAAATATCATATCAAGAATGTTGGATACAAACCCTCAAACAAGGATTACCATTGATGAGATTCTACAAGATCCTTGGTTCAAAGTTGGTGAATATAAACCTAAACCTGATCAGGTTATGTTTACAAAGCATGATGAATGGGAGAAAATCACAAACAAGTGTTTAAATGCATTTGATTTGATATCATTTTCAAGTGGTTTAGACATGTCAAGTTTGGTTGCAAATTCCAATGTTATGGATCAAATGGAGAGAATGATATTGAGAGAAACATGTGAGAAGATAATGGAGAAGGTGAAAGAAGTGGCTAAGAGAAGAAGGGTAACAATTACAAAGAACAAGAATGATTTTGTAGCAAAGTTAGATGGGCAAGATGGTAATTTTGTGGTCTATGTTGTGTGTTATCAGTTAACTGATGAGTTATTAGTAGTTGAGATAAAGAGGAAGGAAAAACAAAAGGGAAGTAGTTTACAATTTTGGAAGGATTTAAGATCCCAAATTCTTGAGTTCACTTCATAA 1293 0.3581 MRKDSHNNTLRGEETESKNSTILFGKYKIHKLLGVGASAKVYHATNIDTGKSVAVKVVNKNKAMKSGFKTNIEREISIMHKLDHHPNIVKIFEVLATKSKIYIVMEFVSGGELFQEVSTEGHFSEDLSRKYFQQLISAVKFCHSNGVFHRDLKLDNLLIDENKDLKVTDFGLSAVKDSTQLNNDGLLKTICGTPAYVAPEILSKKGYDGAKVDVWSCGVVLFALSVGYLPFNDYNITVLYRKIYRGQFRLPKGLLSHGLRNIISRMLDTNPQTRITIDEILQDPWFKVGEYKPKPDQVMFTKHDEWEKITNKCLNAFDLISFSSGLDMSSLVANSNVMDQMERMILRETCEKIMEKVKEVAKRRRVTITKNKNDFVAKLDGQDGNFVVYVVCYQLTDELLVVEIKRKEKQKGSSLQFWKDLRSQILEFTS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1193 430 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 10 421 - -
Lan13g1193 430 PANTHER - 10 421 - -
Lan13g1193 430 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Lan13g1193 430 Pfam Protein kinase domain 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1193 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lan13g1193 430 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Lan13g1193 430 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Lan13g1193 430 Gene3D Transferase(Phosphotransferase) domain 1 110 312 - -
Lan13g1193 430 SUPERFAMILY Protein kinase-like (PK-like) 23 287 IPR011009 -
Lan13g1193 430 Gene3D Kinase associated domain 1, KA1 313 429 - -
Lan13g1193 430 ProSiteProfiles Protein kinase domain profile. 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1193 430 CDD CIPK_C 315 426 - -
Lan13g1193 430 Pfam NAF domain 313 370 IPR004041 GO:0007165
Lan13g1193 430 SMART serkin_6 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1193 Lan-Chr13 17545986 17547546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1193 19 426 CBL-interacting serine-threonine protein kinases AT2G30360 53.571 1.22e-147 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan13g1193 Pkinase 2.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1193 - K12761 gmx:100788245 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g1193 13 17545986 17547546 Lan12g0185 12 3016834 3018873 PCT