Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1189 ATGGCTTCTAATTCTTTCTATATTAAGTTACCATTATTCTTATGCCTTATTGGGATAGTTTCAGCTCAATTATCATCTGATTTTTATTCCACAACATGCCCTAATGTTCTTTCAACAATTAAAACAGCTATAGATTCTGCTGTGACCAATGAGGCTCGAATGGGAGCATCATTGCTTCGTCTTCATTTCCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTGCTATTAGATGATGATGATACATCAAACTTTCATGGTGAAAAGAATGCATTAGGCAATGCTAATTCTTTAAGGGGTTTTGATGTAATAGACAGCATAAAGACTCAAGTTGAGAACTTGTGTCCCGGTGTTGTATCTTGTGCTGATATTCTCTCTGTAGCTGCAAGAGATTCAGTTGTTGCTCTTAATGGACCTAGTTGGACAGTGCAATTGGGAAGAAGAGACTCAACAACTGCAAGTTTAACTCTTGCAAACTCAGATTTGCCTAATCCCAATTTGAATCTAAGTAACCTTATCACTGCTTTCTCCAACAAAGGTTTCTCAACACAAGAAATGGTTGCTCTATCAGGATCTCACACAATAGGGCAATCAAATTGTAGATTCTTCAGAACAAGGATATACAATGAGACCAACATTGATACCACCTTTGCAACATCATTGAAAACAAATTGTCCTAGCGCAGGTGGTGATAATAATTTGTCCCCTCTTGATGAAACAACTCCAACAACATTTGACAATGCTTACTTCAAGAACTTGCAAAGCCAAAAGGGTCTTTTGCACTCAGATCAAGAACTCTTTAATGGAGGATCCACAGATTCTCAAGTAAATGCTTATAGTACTGATTCTTCAAGTTTTGCAACTGATTTTGCCAATGCAATGGTTAAAATGGGGAACCTTGGTCCTCTAACTGGGTCAGTTGGTCAGATTAGGACCAACTGCAGAAAAATCAACTGA 957 0.3783 MASNSFYIKLPLFLCLIGIVSAQLSSDFYSTTCPNVLSTIKTAIDSAVTNEARMGASLLRLHFHDCFVQGCDGSVLLDDDDTSNFHGEKNALGNANSLRGFDVIDSIKTQVENLCPGVVSCADILSVAARDSVVALNGPSWTVQLGRRDSTTASLTLANSDLPNPNLNLSNLITAFSNKGFSTQEMVALSGSHTIGQSNCRFFRTRIYNETNIDTTFATSLKTNCPSAGGDNNLSPLDETTPTTFDNAYFKNLQSQKGLLHSDQELFNGGSTDSQVNAYSTDSSSFATDFANAMVKMGNLGPLTGSVGQIRTNCRKIN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1189 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Lan13g1189 318 Gene3D Peroxidase, domain 2 163 297 - -
Lan13g1189 318 PANTHER PEROXIDASE 16 318 - -
Lan13g1189 318 Gene3D - 27 315 - -
Lan13g1189 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 CDD secretory_peroxidase 23 317 IPR033905 GO:0004601|GO:0042744
Lan13g1189 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 PANTHER PEROXIDASE 72-RELATED 16 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g1189 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1189 Lan-Chr13 17521379 17524316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1189 19 318 Peroxidase AT5G05340 64.570 1.62e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1189 K00430 - csin:114318213 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1415 7 19675220 19677026 Lan13g1189 13 17521379 17524316 LSH
Lan13g1189 13 17521379 17524316 Lan12g0189 12 3067499 3071198 PCT