Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1166 ATGTTCATGGGCATCAATATTTGGTATATGAATGATTTTTTCAGATACCCTTTTAATATTTTGGTCTCTTGTTTTAATACACTTGCTCAATGTTGGAATAAAGATGAATCTAGAAGGAAAAAATGCAGTTTTATTATGTACTTTGCATTATTGTTCTTCATGTTCATGCAAGTTCTGGCAAGTTCTACTTTTGTCACAGGGCACCAATTGTTTGATGGTGTGGCTGTGAGAAAATCAGATTATGAAGCATTAAGGGCATTGAAGCATGATTTGATAGACTTCAAAGGGGTTCTAAGAAGCTGGAATGATAGTGGTTTTGGTGCATGTTCAGGTTCATGGTTAGGTATCAAATGTGTTAATGGAGAGGTTATTGTAATTCAGATTCCATTTAAAGGGTTAAGTGGAAAAATCTCTGAGAAAATTGGGAAACTTCAATCTTTAAGGAAGATTAGTCTTCATGATAATCTTCTAACTGGTCCTATACCTTATTCTCTTGGTTTTCTTCCTAATCTTAGAGGTGTTTATCTCTTTAATAACAAGCTTTCAGGTTCTATTCCTCTTTCTATTGGTAATTGTCCAATGCTTCAATCTATTGATGTTAGTAATAACTTGCTTATTGGTAAAATCCCTCCTAGTTTATCAAACTCCACTAGGATATTTAGGATCAATTTGAGCTTTAATTTGCTTTCTGGATCCATTCCTAGTAGTTTTACTATGTCTCATTCTCTTACTATTCTTGCATTACAATACAACAATATTTCTGGTTCTATACCAGATTCTTGGCATGGAATGAGAAACAGAAACAAAGGTTTTGTTTCTTCCAAACTTCAGGTTTTGACACTTGATCATAATCTCATTTCTGGTACTATTCCAGTTTCTATAAGCAAGTTGAGTTTGGTTGAAAACATTTCTTTAAGTCATAACCAGATTATAGGGTCTATACCAAGTGAAATAGGTGCACTTTCAAGGCTTAGATTTCTTGATCTATCAAACAATGCCATCAATGGTAGCATTCCTAAGACCTTATCCAACCTCACTTCTATTGTTTCATTGAACTTAGAAGGAAACCAGCTTGAAAATCATGTACCGGATAGTTTCGAAACCTTGCAAAACCTTTCTATGCTTAATCTCAAGAACAATAAGCTTGATGGAGAAATTCCTGATTCTTTTGCCAAGCTTGCGAATTTGAGTTTTTTCAATGTTTCTTACAACAATCTTTCTGGTCCTATTCCTTCTCTCCTTACCAAAAGATTCAATTCAAGTTCCTTTACAGGGAACCTTCAGTTATGTGGATTTATTGCCTCAAAACCATGTCACTCACCACCACCCGAGATTCTTCCGGCTCCATCACCAAAGCCTTTTTCAAAGCCACACCATCTCAATAAATTAAGCACCAAGATCATACTCCTAATAGCAGCAGGTGTTACCCTCATAATTCTGGTATTCCTATGCTGCTTTTTGTTGTGTTATTTGGTTAAGAAAACGGGTGGTTCAAAAGGAAAGAACGGTAAGGCAAAAACAACAGCATCTGCAAGAAGTATTAAGAAAGTTGGTGGTGGAATCGAATCACCGGGACGTGAAGTTGGTGGGAAGCTAGTTCACTTTGATGGACCATTTGTTTTTACAGCTGATGATCTTCTATGTGCAACTGCTGAGATAATGGAGAAAAGTCCATACGGAACATCGTATAAGGCGACATTGGAGGACGGAAACCATGTTATTGTGCAGAGGCTGAGGGAGAAGACTACTAAAGGGCAGAAGGAGTTTGAAGCAGAAGCTGCTTCACTTGGCAAAATCAGACACCAAAATCTCTTGGCACTTAGAGCCTATTATTTAGGACCAAAAGGAGAAAAGCTTCTTGTCTTTGATTATATGCCCAAAGGAAGCTTAGCATCATTCCTTCATGATAGAGGACCTGAAACTGTGATTGAGTGGCCAACAAGAATGAACATAGCAATCGAAATAACACTTGGTTTATACCATCTCCATAAAGAAGAGAACATAGTACATGGAAATCTTAACTCTAGCAATATTCTATTAGATGAGCAAATAAATGCTCACATCACAGATTTTGGACTTTCAAGATTAGTGACAACTTCTGCAAGAAGTAACATCATTGCTAGTGCAGGAAATGATGGTTATAATCCACCTGAGCTTTCAATAACTAAGAAGCCTAATCAAAAGAGTGATGTTTATAGCCTTGGTGTCATCATTTTGGAACTCCTAACTGGTAAACCACCAGGCGAAAGAAACAAAGGTATGGAATTGGGTGAATGGGTGACATCTATAGTAAAAGAAGAGTGGACAAATGAAGTATTTGATTTGGAACTTATGAAAGATGCATCAGCTATAAGTGATGAACTTCTTAATACATTGAAATTAGCACTTCATTGTGTGGATCCTTCTCCATCATCAAGACCAGAGGTTCAACAAGTTCTTCACCAATTGGAGGAAATCAATAACTAA 2466 0.3662 MFMGINIWYMNDFFRYPFNILVSCFNTLAQCWNKDESRRKKCSFIMYFALLFFMFMQVLASSTFVTGHQLFDGVAVRKSDYEALRALKHDLIDFKGVLRSWNDSGFGACSGSWLGIKCVNGEVIVIQIPFKGLSGKISEKIGKLQSLRKISLHDNLLTGPIPYSLGFLPNLRGVYLFNNKLSGSIPLSIGNCPMLQSIDVSNNLLIGKIPPSLSNSTRIFRINLSFNLLSGSIPSSFTMSHSLTILALQYNNISGSIPDSWHGMRNRNKGFVSSKLQVLTLDHNLISGTIPVSISKLSLVENISLSHNQIIGSIPSEIGALSRLRFLDLSNNAINGSIPKTLSNLTSIVSLNLEGNQLENHVPDSFETLQNLSMLNLKNNKLDGEIPDSFAKLANLSFFNVSYNNLSGPIPSLLTKRFNSSSFTGNLQLCGFIASKPCHSPPPEILPAPSPKPFSKPHHLNKLSTKIILLIAAGVTLIILVFLCCFLLCYLVKKTGGSKGKNGKAKTTASARSIKKVGGGIESPGREVGGKLVHFDGPFVFTADDLLCATAEIMEKSPYGTSYKATLEDGNHVIVQRLREKTTKGQKEFEAEAASLGKIRHQNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHDRGPETVIEWPTRMNIAIEITLGLYHLHKEENIVHGNLNSSNILLDEQINAHITDFGLSRLVTTSARSNIIASAGNDGYNPPELSITKKPNQKSDVYSLGVIILELLTGKPPGERNKGMELGEWVTSIVKEEWTNEVFDLELMKDASAISDELLNTLKLALHCVDPSPSSRPEVQQVLHQLEEINN* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1166 821 Pfam Leucine Rich Repeat 195 215 IPR001611 GO:0005515
Lan13g1166 821 Gene3D Transferase(Phosphotransferase) domain 1 626 821 - -
Lan13g1166 821 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 36 820 - -
Lan13g1166 821 Gene3D Phosphorylase Kinase; domain 1 555 625 - -
Lan13g1166 821 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 36 820 - -
Lan13g1166 821 ProSiteProfiles Leucine-rich repeat profile. 323 346 IPR001611 GO:0005515
Lan13g1166 821 SMART LRR_typ_2 345 368 IPR003591 -
Lan13g1166 821 SMART LRR_typ_2 168 192 IPR003591 -
Lan13g1166 821 SMART LRR_typ_2 369 392 IPR003591 -
Lan13g1166 821 SMART LRR_typ_2 321 344 IPR003591 -
Lan13g1166 821 Pfam Protein tyrosine and serine/threonine kinase 559 816 IPR001245 GO:0004672|GO:0006468
Lan13g1166 821 Pfam Leucine rich repeat N-terminal domain 78 118 IPR013210 -
Lan13g1166 821 CDD STKc_IRAK 556 819 - -
Lan13g1166 821 SUPERFAMILY L domain-like 106 417 - -
Lan13g1166 821 Gene3D Ribonuclease Inhibitor 77 271 IPR032675 -
Lan13g1166 821 Gene3D Ribonuclease Inhibitor 272 442 IPR032675 -
Lan13g1166 821 Pfam Leucine rich repeat 363 406 IPR001611 GO:0005515
Lan13g1166 821 Pfam Leucine rich repeat 320 358 IPR001611 GO:0005515
Lan13g1166 821 ProSiteProfiles Protein kinase domain profile. 548 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1166 821 SUPERFAMILY Protein kinase-like (PK-like) 555 818 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1166 Lan-Chr13 17211418 17216265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1166 71 819 Receptor kinase-like Gene Family AT3G51740 60.077 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan13g1166 PK_Tyr_Ser-Thr 3.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1166 - - gmx:100819102 1085.86