Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1161 ATGAGGATGGGAGAAAGCCATGGCTCAGAATGTTCCAAAACAAGCCTTTGTTGTAATGAAAATGGTTCTGAATGTGAGGCCAATGACAATGAAAGAAGCTCAAGCAAGAGTTCAATAGAAGAGAATGAGAAGAAGAAATCAGTGAGACCTTATGTTAGATCAAAGTTGCCAAGGCTACGTTGGACACATGATCTTCATCTTCGATTTATTCATGCTGTTCAAAGACTTGGAGGACAAGAGAAAGCAACACCAAAGTTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTGAAGAGTCATTTACAGATGTATAGGAGCAAGAAAGTAGAAGACACAAATCAAGTATTGGCTGATCATAGGCTTATGGTAGAAAGTGAAGACAAAAATGTTTATAATCTAAGCCAGCTTCCCATGCTTCAAGGTTATAATCCAAGCCAAAATTCAGCATATAGATATGGATATGGAGATGCTTCATCTCTTGTTGTCTATGAAAACATGATAAATAGTCCTTTCATAGCTAGGATTCCACTAGATGAATCTAGAGCTGGACTTTATAACAGAATGAATGAAAGGATATATGAACCAAAAGATGAAGAATTTATCTCATTTGGTAACCATGTTCGGCCAATCAGAGCTAAACAGTTCATGCGAGATAATAATGTTCCTTTAAATCCATTGGAAGTGAAGAAAACCTTGAAAAGGAAAGGTTCAGATATTAATTTAGATTTATCACTTAAACTAAATTCATCAAAGGTCACTTCTGAAGAGCAAGGAAGCATGGTTGAGGACCTTGAAGTTGATAGCAATTTATCACTTTCTTTGTTATGCCAATCATCTTCTTCTTATCTTAGTAGAAGGTTGAAGGAAACACAAGATTATTGTAAGGACAAAAGGGTCAGTGATCTGAATCTGACAATATGA 933 0.358 MRMGESHGSECSKTSLCCNENGSECEANDNERSSSKSSIEENEKKKSVRPYVRSKLPRLRWTHDLHLRFIHAVQRLGGQEKATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVEDTNQVLADHRLMVESEDKNVYNLSQLPMLQGYNPSQNSAYRYGYGDASSLVVYENMINSPFIARIPLDESRAGLYNRMNERIYEPKDEEFISFGNHVRPIRAKQFMRDNNVPLNPLEVKKTLKRKGSDINLDLSLKLNSSKVTSEEQGSMVEDLEVDSNLSLSLLCQSSSSYLSRRLKETQDYCKDKRVSDLNLTI* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1161 310 MobiDBLite consensus disorder prediction 25 49 - -
Lan13g1161 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 113 IPR017930 -
Lan13g1161 310 Pfam Myb-like DNA-binding domain 59 109 IPR001005 -
Lan13g1161 310 MobiDBLite consensus disorder prediction 22 49 - -
Lan13g1161 310 Gene3D - 56 113 - -
Lan13g1161 310 SUPERFAMILY Homeodomain-like 56 111 IPR009057 -
Lan13g1161 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 112 IPR006447 GO:0003677
Lan13g1161 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 236 310 IPR044848 GO:0003700
Lan13g1161 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 197 IPR044848 GO:0003700
Lan13g1161 310 PANTHER - 6 197 - -
Lan13g1161 310 PANTHER - 236 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1161 Lan-Chr13 17180399 17182321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1161 48 141 G2-like Transcription Factor Family AT2G42660 53.211 2.28e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan13g1161 Myb_DNA-binding 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1161 - - gmx:102662997 304.679