Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1160 ATGGCTACTCCCACAGCATATCTTCCTTCTGCAGCCTCACCTGAATGGTTAAACAAAGGAGATAACTCATGGCAAATGATAGCAGCTACACTTGTTGGTCTTCAAAGCATGCCAGGTCTTGTGATTCTCTATGCAAGTATAGTGAAGAAAAAATGGGCAGTGAATTCAGCTTTCATGGCTCTATATGCATTTGCAGCAGTTCTTATATGTTGGGTACTTGTAGGTTATAGAATGGCCTTTGGTGAAAAACTCTTACCCTTTTGGGGTAAAGGTGCTCCATCATTAGGTCAAAAGTTTCTCATAAAAAGAGCTATAGTACCTGAAACTATTCATTATTATAAAAATGGTACAATTGAGAGTAAAACTGAAGAACCCTTTTTTCCTATGGCTTCACTTGTTTATTTCCAATTCACTTTTGCTGCTATTACTGTTATTTTGTTAGCTGGGTCTGTACTTGGTAGAATGAATATCAAGGCTTGGATGGCTTTTGTTCCTCTTTGGCTTATCTTTTCTTATACTGTTGGTGCCTTTAGTCTTTGGGGTGGTGGATTTCTTTATCATTGGGGTGTTATTGATTATTCTGGTGGCTATGTTATTCACCTCTCTTCTGGAATTGCTGGTTTCACTGCTGCTTATTGGGTTGGACCAAGGTTGAAGAGTGATAGGGAGAGATTCCCACCAAACAATGTGCTGCTTATGCTTGCAGGTGCTGGTTTACTATGGATGGGTTGGTCAGGGTTTAATGGTGGAGCACCATATGCAGCAAACATGGTTTCTTCAATTGCTGTTTTGAACACAAACATTTGTGCAGCCACTAGCCTCCTTGTATGGACATGTCTCGACGTCGCCTTCTTCGGGAAACCGTCGGTCATCGGAGCTGTTCAGGGCATGATGACTGGACTAGTATGCATTACCCCTGGTGCAGGTATGCATTGCTTATAG 942 0.4161 MATPTAYLPSAASPEWLNKGDNSWQMIAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVGYRMAFGEKLLPFWGKGAPSLGQKFLIKRAIVPETIHYYKNGTIESKTEEPFFPMASLVYFQFTFAAITVILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANMVSSIAVLNTNICAATSLLVWTCLDVAFFGKPSVIGAVQGMMTGLVCITPGAGMHCL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1160 313 PANTHER AMMONIUM TRANSPORTER MEP2 1 310 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lan13g1160 313 PANTHER AMMONIUM TRANSPORTER 1 310 - -
Lan13g1160 313 ProSitePatterns Ammonium transporters signature. 192 217 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lan13g1160 313 Pfam Ammonium Transporter Family 24 309 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lan13g1160 313 PRINTS Rhesus blood group protein signature 136 152 IPR002229 GO:0005887
Lan13g1160 313 PRINTS Rhesus blood group protein signature 231 249 IPR002229 GO:0005887
Lan13g1160 313 PRINTS Rhesus blood group protein signature 262 284 IPR002229 GO:0005887
Lan13g1160 313 Gene3D Ammonium transporter AmtB like domains 6 312 IPR029020 -
Lan13g1160 313 SUPERFAMILY Ammonium transporter 16 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1160 Lan-Chr13 17171526 17176206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1160 129 310 Inorganic Solute Cotransporters AT2G38290 87.912 3.15e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1160 K03320 - gmx:100790119 568.926