Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1158 ATGGAGTACAACATTCCAAACCCTACCTCAAAAGGGTTGAATAATAAAAACAAAAGAGTGAAGCTTTCAACTGATCCACAAAGTGTTGCAGCTAGAGAAAGAAGGCATAGAATAAGTGATAGATTCAAGATCCTTCAAAGCATGGTCCCTGGAGGGAGTAAAATGGACACAGTTTCTATGTTGGAAGAAGCTATTCACTATGTTAAGTTCCTCAAGAATCAGATTTGTTTTCACCAAAAAATGATAAACTTTGTTGATATTGTTGATGATTCTTCACTCATTATGTTACCATCTCAAAAATATTTTCCTCATCATGGAGAAAATATCATTTCAATTCAGCAACAAAACACTTCAGTGGAGGAACAATGCTTCTTCCAAGGTGAAGATAATGCCATTGTCACCATTGATGATAACATGAAATATTGGCCAGCTTAG 435 0.354 MEYNIPNPTSKGLNNKNKRVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKNQICFHQKMINFVDIVDDSSLIMLPSQKYFPHHGENIISIQQQNTSVEEQCFFQGEDNAIVTIDDNMKYWPA* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1158 144 Pfam Helix-loop-helix DNA-binding domain 32 71 IPR011598 GO:0046983
Lan13g1158 144 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 15 117 - -
Lan13g1158 144 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 27 81 IPR036638 GO:0046983
Lan13g1158 144 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 22 71 IPR011598 GO:0046983
Lan13g1158 144 CDD bHLH_AtIND_like 23 82 - -
Lan13g1158 144 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 117 IPR045843 GO:0003700|GO:0006355
Lan13g1158 144 Gene3D - 13 84 IPR036638 GO:0046983
Lan13g1158 144 SMART finulus 28 77 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1158 Lan-Chr13 17158606 17159040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1158 16 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 42.593 1.08e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan13g1158 HLH 4.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1158 - - gmx:113001230 142.895