Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1146 ATGAATCATTCTTGTGTAAACTCCAAGAGCAAAGTATTCCACATCCTCTTTGGGTTATTTTCTCTTTCTTGCATGACCTTATTATTCTTTCACTTTGAGACAGCAACAGCAACAACAACAGCAACTGAAACTGATTTGCATGCCTTACTTGAGTTCAAGAGTCATATAATAGAAGATCCATTCCATATTATGAGTTCATGGAATGATTCTATCCATCACTGCAACTGGACAGGAATCACATGCAACAAATCTAATCAAAGGGTAATGAACTTGAACCTTAATACACAAGGGTTGGTAGGTACTATTACACCATATATAGGAAACTTAACATTCCTAACACAACTCAACCTATCTTTCAATAGTTTCCATGGTCAACTACCTCAAGAGTTTGGACATTTACTCTACCTAAAAAGGCTATCTATCTATAGCAACTACTTTAGTGGAAACATTCCTAGTAATCTAAGTCATTGTACACAACTAATAGTATTGGCTGCTGGTGTAAATAACCTTACAGGAACAATACCAACTTGGGTAGGAAATTTATCTTCTTTAGTTGGTTTTTCGATCCGAAGGAACAACTTGCATGGAAATATACCACATGAGTTAGCGTATTTATCAAGATTGAGGATTCTTGGGCTAGGTGAGAATTACTTGTCTGGCACAGTTCCTTCTTCAGTTTATAATATTTCTTCCATTTCCACTTTTTCTGTTACTCAAAACCATCTCCATGGAAACATACCAGATGATATTGGCTTCACTCTTCCAAACCTTCAAGTACTTTTCTTTGGGTTCAACAATTTCACAGGAACTATTCCTGCATCATTGGTAAATTCAACTAAACTTGAATCTCTTGAGTTCTCTAAAAATGGCCTAGTTGGTACCATTCCTAAGAACATAGGTATCTTGAATGGATTAACCATTCTTAATTTTGAAAGCAATAGACTTGGAACTAGGACATCTCATGACCTTGGCTTTCTTGATTCTTTGGTTAACTGCACTGATCTAGAATATCTAGGTCTAGAAGGAAACAATTTTGGTGGAAAGATGCCCAACTCAATTGCTAATCTTTCAACCCAATTGCACTCACTTACCTTAGGATCCAATCAAATATATGGAAGTATACCTCTTGGGATTGGTAAACTTTCCAACTTGGCTACTCTAGAATTGGACAATAACTTGCTAAGTGGTAGTGTTCCAGATGCATTAGGTATGCTTCAAAATCTACAAGAATTGTATCTTGGTGGAAACAAATTTTCAGGAGGAATCCCATCCTCCATAGGAAATTTATCTTCATTAACAAAACTCTATATGGAGTTGAACTACTTTGAGGGAAGTATACCTTCTAGTCTTGGAAATTGCCACAAGTTATTGTTACTTAGCCTTTCTAATAACAAGCTTACTGGCATCATACCAAAAGAAGTTATTAGCATTTCTTCACTAGCAATATTCTTTGATGTGTCTAATAACAGTTTGTCAGGGACTTTGCCCAATGAAGTTGATAAACTTGTGAATCTTGGAGAGTTGGATCTATCAGAAAACAATTTCTCTGGTGTCATTCCATCTTCTTTTGGTAGCTGCACTAGTTTGGAACAACTGTATTTGCAGGGTAACAATTTTGAGGGAAACATTCCTCATACTATAGAGAAATTGAGAGGCTTAGAAGATATTGATCTTTCACACAATAACTTGTCTGGTATGATTCCTGAATTTCTTGGTGATTCCATAGTGCTCCAGCATCTAAATCTTTCTTACAACAATCTAGAGGGAGAAATTCCTAAGAATGGAATCTTCAAGAATGCAACTGCTATATCAATTTATGGAAACAAAAAACTTTGTGGTGGTGTCCTAGAATTAAATCTACCCCCATGTAGAAATAAGAACACATCTCTTGTAAAAAAAATTCTTGCCCCAAAGTTAGCTATCCCTATAGTTAGTGCATTTGTATTCCTACTTTTTCTATCTTGTTTTCTTGCATTCCTTATGGTAAAGAGATCAAGAAAGAAAACTTCAAGAAGAGAGGATTTAGAATTGCAAATTTCTTACTCTGTCATTGCAAAGTGCACTGGAGGATTCTCTCAGGATAACTTGATTGGCTCAGGAAGTTTTGGTTCCGTGTACAAAGGGACTCTTCCAAGTGATGGAGCAACTATTGCTATCAAAGTGTTAAATCTTGAACAAAGAGGAGCTTCAAGGAGTTTCATTGATGAATGCAATGTTCTGAAAAATATAAGGCACCGAAACCTTCTCAAGATTATAACTGCCATAGCAAGTGTTGATTATCAAGGTAATGACTTCAAAGCTTTGGTCTTTGACTTCATGTCAAATGGCAGCCTAGAATGTTGGTTGCATCCTACAAATAATATGCAACATCAGACAAAGACATTGACATTTATTCAAAGATTGAACATAGCAATTGATGTTGCTTGTGCACTTGAATATCTCCACCACTCTTGTCAAACTGCAATTGTTCATTGTGATATAAAGCCAAGCAATGTACTTTTGGATAATGATATGGTGGCTCATGTTGCTGACTTTGGATTATCTACATTTCTATATGAAGAATCTAGCAACTTTTCCATACAATCCATTATGTCTTCTAGCCTAAAGGGTTCTATTGGATACATTCCACCAGAGTATGGCATGGGTGGCAAGGCTTCTGTACTAGGAGATATATACAGTTATGGGATACTACTATTGGAGATTTTCACAGGAAAAAGACCAACAGATGAGGCATTTGAAGGTGACATTGGAATTCAACAGTTTATTGCAATGGCTTTACCCAATCATGTGATGGATATAATTGATCCTTCCATATTCCTTGAGCAAGAACTTGATGAAAATCAACAAGTTGAAGGAGAAGAAAATGCTTTAAGGAGGGACTTTGATATTGATGTTGAAGCTAGGTATAAATGTTTGATGAAGGATGGTATTGTATCAGTGATCCAAATTGGAGTTTCTTGCTCTGCAACTTCACCAAGTGAAAGGATGCATATCACTGAGGTGGTCAACAAACTACACGCTATCAAGAACTCTTTCATGAGGATAAGGCATAATACACATGCAACCCGTCGAACGGTAAGTTAG 3084 0.3635 MNHSCVNSKSKVFHILFGLFSLSCMTLLFFHFETATATTTATETDLHALLEFKSHIIEDPFHIMSSWNDSIHHCNWTGITCNKSNQRVMNLNLNTQGLVGTITPYIGNLTFLTQLNLSFNSFHGQLPQEFGHLLYLKRLSIYSNYFSGNIPSNLSHCTQLIVLAAGVNNLTGTIPTWVGNLSSLVGFSIRRNNLHGNIPHELAYLSRLRILGLGENYLSGTVPSSVYNISSISTFSVTQNHLHGNIPDDIGFTLPNLQVLFFGFNNFTGTIPASLVNSTKLESLEFSKNGLVGTIPKNIGILNGLTILNFESNRLGTRTSHDLGFLDSLVNCTDLEYLGLEGNNFGGKMPNSIANLSTQLHSLTLGSNQIYGSIPLGIGKLSNLATLELDNNLLSGSVPDALGMLQNLQELYLGGNKFSGGIPSSIGNLSSLTKLYMELNYFEGSIPSSLGNCHKLLLLSLSNNKLTGIIPKEVISISSLAIFFDVSNNSLSGTLPNEVDKLVNLGELDLSENNFSGVIPSSFGSCTSLEQLYLQGNNFEGNIPHTIEKLRGLEDIDLSHNNLSGMIPEFLGDSIVLQHLNLSYNNLEGEIPKNGIFKNATAISIYGNKKLCGGVLELNLPPCRNKNTSLVKKILAPKLAIPIVSAFVFLLFLSCFLAFLMVKRSRKKTSRREDLELQISYSVIAKCTGGFSQDNLIGSGSFGSVYKGTLPSDGATIAIKVLNLEQRGASRSFIDECNVLKNIRHRNLLKIITAIASVDYQGNDFKALVFDFMSNGSLECWLHPTNNMQHQTKTLTFIQRLNIAIDVACALEYLHHSCQTAIVHCDIKPSNVLLDNDMVAHVADFGLSTFLYEESSNFSIQSIMSSSLKGSIGYIPPEYGMGGKASVLGDIYSYGILLLEIFTGKRPTDEAFEGDIGIQQFIAMALPNHVMDIIDPSIFLEQELDENQQVEGEENALRRDFDIDVEARYKCLMKDGIVSVIQIGVSCSATSPSERMHITEVVNKLHAIKNSFMRIRHNTHATRRTVS* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1146 1027 Pfam Leucine rich repeat 359 418 IPR001611 GO:0005515
Lan13g1146 1027 Pfam Leucine rich repeat 485 539 IPR001611 GO:0005515
Lan13g1146 1027 ProSiteProfiles Protein kinase domain profile. 691 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1146 1027 Gene3D Phosphorylase Kinase; domain 1 656 772 - -
Lan13g1146 1027 Gene3D Ribonuclease Inhibitor 328 626 IPR032675 -
Lan13g1146 1027 Gene3D Ribonuclease Inhibitor 192 327 IPR032675 -
Lan13g1146 1027 Gene3D Ribonuclease Inhibitor 41 191 IPR032675 -
Lan13g1146 1027 Coils Coil 940 960 - -
Lan13g1146 1027 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Lan13g1146 1027 SMART LRR_typ_2 381 404 IPR003591 -
Lan13g1146 1027 SMART LRR_typ_2 577 599 IPR003591 -
Lan13g1146 1027 SMART LRR_typ_2 405 429 IPR003591 -
Lan13g1146 1027 SMART LRR_typ_2 502 525 IPR003591 -
Lan13g1146 1027 SMART LRR_typ_2 109 132 IPR003591 -
Lan13g1146 1027 SMART LRR_typ_2 550 573 IPR003591 -
Lan13g1146 1027 SMART LRR_typ_2 254 278 IPR003591 -
Lan13g1146 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Lan13g1146 1027 Gene3D Transferase(Phosphotransferase) domain 1 773 1025 - -
Lan13g1146 1027 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 40 164 - -
Lan13g1146 1027 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 162 1009 - -
Lan13g1146 1027 SMART serkin_6 691 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1146 1027 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Lan13g1146 1027 SUPERFAMILY L domain-like 358 613 - -
Lan13g1146 1027 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 162 1009 - -
Lan13g1146 1027 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 40 164 - -
Lan13g1146 1027 SUPERFAMILY RNI-like 90 419 - -
Lan13g1146 1027 SUPERFAMILY Protein kinase-like (PK-like) 676 1005 IPR011009 -
Lan13g1146 1027 Pfam Protein kinase domain 692 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1146 1027 Pfam Leucine Rich Repeat 577 593 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1146 Lan-Chr13 17071692 17075312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1146 43 1019 Receptor kinase-like Gene Family AT3G47570 43.547 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan13g1146 Pkinase 8.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1146 - - gmx:106794146 1310.05