Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1145 ATGGGTTCAAACCAACAACATTTGCAAGAGCCATGGATGTTGGAGAATGGTGGAAACAACATAAAAGGGTTGAGCAAAGAAACAAGACATGGTCGCACAGCACATAACATGTCATCATCTTCATTGAGAAAGAAGTCTAGTTTAACTCTTGTGACAAAGATTCGTTGTGGTTTGCTAAGAAACTTGGTTGCTAACTTTCAAGAAGTTATTCTTGGTACCAAGCTTTCCATTTTGTTCCCTGCAATTCCTGTTGCAATCTTTGCTCAATGCTATGGCCTTGGAAGGCCCTGGATTTTTGCATTGAGCTTACTAGGGCTAACCCCACTTGCTGAACGTGTCAGCTTCCTCACAGAACAAGTTGCTTTTTACACCGGTCCCACAGTGGGAGGACTTCTGAATGCAACATGTGGGAATGTTACTGAACTCATAATAGCAATATTTGCCCTTACTAGTGGCCAAGTTGCTGTGGTTAAGTATTCTCTCTTAGGTTCCATCCTTTCAAACCTTCTACTAGTTCTTGGAACCTCTCTATTTTGTGGTGGCATTGCAAACATTGGAGTTGAACAAAAATATGACAGAAGACAAGCAGATGTAAACTCACTTATGCTACTATTAGCATTGTTGTGCCATTTGCTTCCACTTCTTTTTGGATATAGTGGAGCACCAATCTCACTCACCAAAGATTCATCATTGCATTTTTCAAGAGCTTCTAGCATTGTCATGTTGATTGCATATTTTGTTTACCTTATTTTTCAACTCTTTACACACAGGGAGTTATTTGAGGCTGAAGAGGATGATGAAAGTGGTGAGAATGGCTCAGAAGAACAAGCTGTGATTGGATGCTGGAGTGCAGTTTCTTGGCTGATTGGGATGACTCTAATCATTGCTTTCTTGTCTGAATTTGTGGTGGCAACAATTGAGGAAGCATCAGATTCATGGGGTTTATCTGTCAGTTTCCTTAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAATAAGCTGGACATAACATTAGGTGTTGCATTGGGTTCATCAACTCAAATTGCCATGTTTGTGGTTCCTCTATGTGTGATAGTTGCATGGATAGCAGGTGTGGAAATGGACCTAAACTTGAACCTCTTAGAAACAGGTTCACTTGCTTTGGCAATAATAGCCACAAGCTTCACTTTGCAGGATGGTACTTCTCACTACATGAAAGGCTTTATTCTCCTACTTTGCTACATTGTTATTGGAGCTTGCTTCTTTGTACAAAGATCACCTCTTAACCAAGTTGATATAATCACTCTTAAATCAACAACTGATGCAGTTTTAAGTGCTTAG 1356 0.4012 MGSNQQHLQEPWMLENGGNNIKGLSKETRHGRTAHNMSSSSLRKKSSLTLVTKIRCGLLRNLVANFQEVILGTKLSILFPAIPVAIFAQCYGLGRPWIFALSLLGLTPLAERVSFLTEQVAFYTGPTVGGLLNATCGNVTELIIAIFALTSGQVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIGVEQKYDRRQADVNSLMLLLALLCHLLPLLFGYSGAPISLTKDSSLHFSRASSIVMLIAYFVYLIFQLFTHRELFEAEEDDESGENGSEEQAVIGCWSAVSWLIGMTLIIAFLSEFVVATIEEASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDITLGVALGSSTQIAMFVVPLCVIVAWIAGVEMDLNLNLLETGSLALAIIATSFTLQDGTSHYMKGFILLLCYIVIGACFFVQRSPLNQVDIITLKSTTDAVLSA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1145 451 Gene3D - 275 427 IPR044880 -
Lan13g1145 451 Gene3D - 126 269 IPR044880 -
Lan13g1145 451 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 9 439 - -
Lan13g1145 451 TIGRFAM caca2: calcium/proton exchanger 61 427 - -
Lan13g1145 451 Pfam Sodium/calcium exchanger protein 97 253 IPR004837 GO:0016021|GO:0055085
Lan13g1145 451 Pfam Sodium/calcium exchanger protein 285 422 IPR004837 GO:0016021|GO:0055085
Lan13g1145 451 TIGRFAM cax: calcium/proton exchanger 81 427 IPR004798 GO:0006816|GO:0015369
Lan13g1145 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 9 439 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1145 Lan-Chr13 17061750 17065915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1145 10 436 Antiporters AT2G38170 68.664 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1145 K07300 - gmx:100779440 662.529