Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1126 ATGGCATTCATATTTCCAAATATTTCTTTAATGGGTTTGTTTGCATTCCTAATAGCCTCTTTATCTCATACTACTTCAGCTGCAATGCAAAGAGAGAGTGAAGCAAATGCTCTATTGAATTGGAAAGCAAGCCTTGACAACCAAAGCCAGGTTTCATTGTCTTCATGGTATGGTAATAATCCTTGCAGTAATTGGGTTGGAATCCATTGTGATGAGTCCAAATCTGTCTCCAATATAAGTCTTAGAGATATGGGACTAAGAGGTATGCTTCATAGTCTCAACTTCTCATCATTTCCAAATATTCATGTCTTTGATTTTTCTAGTAACTTTCTCTCAGGTAGAATCCCCCCTACAATAGGAAATTTGAGCAATTTACAAGAACTTTACCTTTACAACAACACACTCTCTAGTTCTATTCCTGATGAAGTAGGAAAACTCTATTCTCTTACCCACATGCAGTTGTCACATAATAATCTTTCTGGGTCAATCCCACTCTCCATAGGTAACTTGGTTAATTTAGAAAACTTACTTCTTTATACAAATAAACTCTCTGGACCAATTCCTTTTACTTTCGGAAACTTGACCAAGCTCAAATACCTATCCTTATTTTCAAATAACTTGTCAGAATCAATTCCTCCAACTTTTGAAAACTTGACCCATTTGGAAACATTGCAATTAGCTTATAATCTTTTAACAGGCCATTTGCCTCACAACATTTGCCTTGGTGGAATGTTGACCAAATTTTCTGCTACCAATAACCATTTCACAGGTCCAATTCCAAAGAGTCTGAAGAATTGTTCCAGTCTTAAAAGAGTAAGACTAGAACAAAATCAACTGACTGAAAATATGACACAAGGTACTTTTGAGTGTCCAAATTTGGACTACATTGATTTAAGTGACAATAACTTATATGGAAATCTTTCACCAAACTGGGGGAAATGCTACAAACTCACAAGTCTCAAGATCTCTGACAATAATTTATCTGGTGTTATACCACAAGAACTAGGAGAGGCAACCAACCTACGTGAACTTCACCTATCTTCGAACCATCTTATAGGACAAATTCCGAAGGAGCTAGGTAAGTTGACTTTGTTGATCAAACTCCTCATAAGCAGCAATCTCCTTTCAGGAAATGTTCCCATAGAAATAACGTCATTGAAGGATCTCCAATTCTTAGGGCTTGCTGAAAATGATTTCAGTGGCTTCATCACAAAACAACTAGGAAGTTTGCCCAATTTATTACTGTTGAATTTAAGTTATAATAAATTTGTGGGACATATTCCTCTTGAGTTTGATAAATTCAAACAACTTCAAAGCCTTGATCTTAGTAAGAATTTCTTTGGCGGAAAAATACCCTTCATACTTGGAAAGTTGAAATACCTAGAAACATTGAATCTTTCACATAATAATCTTTCTGGTACCATACCCTCTGATTTTGATGATATGTTAAGCTTGACAAATGTTGACATATCATACAACCAATTAGAAGGTCCACTTCCAAATATTCCTGCCTTTCAAAAAGCTTCAATTAATGCATTGAGAAATAATAAAGGCTTGTGTGGTAAAATCTCCGGCCTTGAACCTTGCCCACCAACATCAAGTAGAAAATCTCATCATCACCAAAATACCAAAGTTATAGTACTTGTTTTATCTATTTCTTTGAGCATTCTACTACTTACGCTTTTGGTGGTTTTTATCTTATGTCGCCTTCACCGAAGTGCAACTACAAATGAAAACCAAGTTGTTGAGCCACAAAATCAAAATCTATTTGCAATATGGAGTTATGATGGGAAAATGGTGTATGAGAATATCATTGATGCCACAGAAGATTTTGACAACAAATATCTCATTGGAGTTGGAGGATGTGGATCTGTTTATAGAGCTGAATTGCCATATGGTGAAGTTGTTGCTGTGAAAAAACTCCATTCAATACCAAATGAGGAATCATATATTCTCAAAGCTTTCCAAAGTGAGATAAAAACTTTGACAGAAATTCGGCATCGTAACATTGTGAAGCTATATGGGTTTTGTTCACATTCTCAACACTCATTTTTGGTTTATGATTTGGTGGAAAGAGGTAGCATTGATAAGGTCCTCCAAAATGATGCACATGCCAATGAATTTCATTGGAAAAGAAGGGTGAATGTTGTTAAAGGAGTTGCTAATGCATTGAGCTATATGCACCATGATTGTTCACCTCCTATAATTCATAGAGACATATCATCAAAGAATGTCCTTTTAGATTTGGAGTATAAAGCTCATGTTTCTGATTTCGGAACATCTAAGTTTCTTAATCCAGATTCTTCAAATCTAACCTCATTTGCAGGCACTTATGGATATATTGCTCCAGAACTTGCATATACTATGGAAGTGAATGAGAAATGTGATGTTTACAGCTTTGGGGTATTTGCTTTGGAAGTAATATTTGGAAAGCATCCCGGAGAAATTATATCATCTACAATGTTATCATCTTCTTTTGAAGTTGACAATTTCTCATTGAATGATAATTTGGATCAACGTCTTCCTCATCCTATGAATCCAATTGATAAGGAAATTATATCAATCCTTAGAATAGCAACTTCATGCTTGAGAGAAAATCCACATTCTCGACCTACCATGAAATATATAGTGAAAGAACTCTTAATTTCTCCATATGTTACTTAG 2664 0.3514 MAFIFPNISLMGLFAFLIASLSHTTSAAMQRESEANALLNWKASLDNQSQVSLSSWYGNNPCSNWVGIHCDESKSVSNISLRDMGLRGMLHSLNFSSFPNIHVFDFSSNFLSGRIPPTIGNLSNLQELYLYNNTLSSSIPDEVGKLYSLTHMQLSHNNLSGSIPLSIGNLVNLENLLLYTNKLSGPIPFTFGNLTKLKYLSLFSNNLSESIPPTFENLTHLETLQLAYNLLTGHLPHNICLGGMLTKFSATNNHFTGPIPKSLKNCSSLKRVRLEQNQLTENMTQGTFECPNLDYIDLSDNNLYGNLSPNWGKCYKLTSLKISDNNLSGVIPQELGEATNLRELHLSSNHLIGQIPKELGKLTLLIKLLISSNLLSGNVPIEITSLKDLQFLGLAENDFSGFITKQLGSLPNLLLLNLSYNKFVGHIPLEFDKFKQLQSLDLSKNFFGGKIPFILGKLKYLETLNLSHNNLSGTIPSDFDDMLSLTNVDISYNQLEGPLPNIPAFQKASINALRNNKGLCGKISGLEPCPPTSSRKSHHHQNTKVIVLVLSISLSILLLTLLVVFILCRLHRSATTNENQVVEPQNQNLFAIWSYDGKMVYENIIDATEDFDNKYLIGVGGCGSVYRAELPYGEVVAVKKLHSIPNEESYILKAFQSEIKTLTEIRHRNIVKLYGFCSHSQHSFLVYDLVERGSIDKVLQNDAHANEFHWKRRVNVVKGVANALSYMHHDCSPPIIHRDISSKNVLLDLEYKAHVSDFGTSKFLNPDSSNLTSFAGTYGYIAPELAYTMEVNEKCDVYSFGVFALEVIFGKHPGEIISSTMLSSSFEVDNFSLNDNLDQRLPHPMNPIDKEIISILRIATSCLRENPHSRPTMKYIVKELLISPYVT* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1126 887 Pfam Protein kinase domain 613 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1126 887 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Lan13g1126 887 Pfam Leucine rich repeat 291 351 IPR001611 GO:0005515
Lan13g1126 887 SUPERFAMILY Protein kinase-like (PK-like) 594 881 IPR011009 -
Lan13g1126 887 Gene3D Ribonuclease Inhibitor 240 533 IPR032675 -
Lan13g1126 887 SUPERFAMILY L domain-like 263 522 - -
Lan13g1126 887 Gene3D Transferase(Phosphotransferase) domain 1 690 883 - -
Lan13g1126 887 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 106 883 - -
Lan13g1126 887 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 117 - -
Lan13g1126 887 SUPERFAMILY L domain-like 71 333 - -
Lan13g1126 887 ProSitePatterns Tyrosine protein kinases specific active-site signature. 735 747 IPR008266 GO:0004672|GO:0006468
Lan13g1126 887 SMART LRR_typ_2 218 242 IPR003591 -
Lan13g1126 887 SMART LRR_typ_2 410 433 IPR003591 -
Lan13g1126 887 SMART LRR_typ_2 122 146 IPR003591 -
Lan13g1126 887 SMART LRR_typ_2 339 362 IPR003591 -
Lan13g1126 887 SMART LRR_typ_2 458 481 IPR003591 -
Lan13g1126 887 SMART LRR_typ_2 194 217 IPR003591 -
Lan13g1126 887 SMART LRR_typ_2 170 193 IPR003591 -
Lan13g1126 887 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Lan13g1126 887 Gene3D Phosphorylase Kinase; domain 1 571 689 - -
Lan13g1126 887 Pfam Leucine Rich Repeat 461 480 IPR001611 GO:0005515
Lan13g1126 887 ProSiteProfiles Protein kinase domain profile. 611 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1126 887 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 106 883 - -
Lan13g1126 887 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 117 - -
Lan13g1126 887 Gene3D Ribonuclease Inhibitor 185 239 IPR032675 -
Lan13g1126 887 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1126 Lan-Chr13 16806668 16809837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1126 95 783 Receptor kinase-like Gene Family AT4G08850 46.341 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan13g1126 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1126 - - lang:109325562 1304.66