Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1125 ATGGCATTCATATTTCCAAATATTTCTTTAATGGGTTTGTTTGCATTCCTAATAGCCTCTTTATCTCATACTACTTCAGCTGCAATGCAAAGAGAGAGTGAAGCAAATGCTCTATTGAATTGGAAAGCAAGCCTTGACAACCAAAGCCAGGTTTCATTGTCTTCATGGTATGGTAATAATCCTTGCAGTAATTGGGTTGGAATCCATTGTGATGAGTCCAAATCTGTCTCCAATATAAGTCTTAGAGATATGGGACTAAGAGGTATGCTTCATAGTCTCAACTTCTCATCATTTCCAAATATTCATGTCTTTGATTTTTCTAGTAACTTTCTCTCTGGTAGAATCCCCCCTACATTAGGAAATTTGAGCAATTTACGAGAACTTTACCTTTACAACAACACACTCTCTGGTCCCATTCCTAGTGAAATTGGATTGATTTCAAGTATGCAGGATCTTGATTTTTCTGATAATTTTCTCTTTGGTAGAATCCCCGCTACATTAGGAAATTTGAGCAATTTACAAAATCTTTACATTTACAACAGCACACTCTCTAGTTCTATTCCTGATGAAGTAGGAAAACTCTATTCTCTTACTGGCATGCATTTGTCACATAATAATCTTTCTGGGTCAATCCCAATCTCCGTAGGTAACTTGGTTAATTTGGATAACTTGTTTCTTTTTACAAATAAACTCTCTGGACCAATTCCTTTCACTATTGGAAACTTGACCAAGCTCAAATACTTATCCTTATATTCAAATAATCTTTCTGGGTCAATCCCACTCTCCATAGGTAACTTGGTTAATTTGGAAAAATTAATTCTTTATACAAATAAACTCTCTGGACCAATTCCTTTCACTATTGGAAACTTGACCAAACTCAATTACCTATCCTTATATTCAAATAATCTTTCTGGGTCAATCCCACACTCCATAGGTAACTTAGTTAATTTGGAAAGCTTGAGTCTTAGTAGAAATAAACTCTCTGGACCAATTCCTTTCACTATTGGAAACTTGACCAAGCTCAAATACCTAATCTTATTATCAAATAAGCTGTCAGAATCAATTCCTCCAACTTTTGAAAACTTGACGCATTTGGAATCATTGCAATTAAGTGGTAATCATTTAATAGGTCATTTGCCTCACAACATTTGCCTTGGTGGAAAGTTGACCAATTTTTCTGCTGACAATAACAATTTCACAGGTCCAATTCCAAAGAGTCTAAAAAATTGTTCGAGTCTTATAAGAGTAAGACTAGACCAAAACCAATTGACCGAAAATATGACACAATGTACTTTTGAGTGTCCAAATTTGGACTACATTGATTTAAGTGACAATAACTTATATGGGAACCTTTCACCAAATTGGGGGAAATGCTATAAACTCACAAGTCTCAAGATCTGTGACAATAATTTATCTGGTGTTATACCACAAGAACTAGGAGAGGCAACCAACCTACGTGAACTTCACCTATCTTCGAACCATCTTATAGGACAAATTCCGAAGGAGCTAGGTAAGTTGACCTTGTTGATCAAACTCCTCATAAGCAGCAATTTCCTTTCAGGAAATGTTCCGATAGAAATAGCATCGTTGAGGGATCTCCGAAACTTGGCGCTCGCTGAAAATGATTTTAGTGGCTTCATCACAAAACAACTAGGAAGTTTACCCAATTTATTGGAGTTGAATTTGAGCTATAACAAATTTGTGGGACATATTCCTGTTGAGTTTGGCAAATTCAAACAACTTCAAAGCCTGGATCTTAGTAAGAATTTCTTTGCAGGAAAAATACCCTTCATACTTGGAAAGTTGAAATACCTAGAAACATTGAATCTTTCACATAATAATCTTTCTGGTACCATACCCTCTGATTTTGATGATATGTTAAGCTTGACAAATGTTGACATATCATACAACCAATTAGAAGGTCCACTTCCAAATATTCCTGCCTTTCAAAAAGCTTCAATTAATGCATTGAGAAATAATAAAGGCTTGTGTGGTAAAATCTCTGGCCTTGAACCTTGCCCACCAACATCAAGTAGAAAATATCATCATCACCAAAATACCAAAGTTATAGTACTTGTTTTATCTATTTCGTTGAGCATTCTACTACTTATGCTATTGGTGTTTTTTATCTCAAGTCGCCTTCACCGAAGTGCAACTACAAATGAAAACCAAGTTGTTGAGCCACAAAATCAAAATCTATTTGCAATATGGAGTTATGATGGGAAAATGGTGTATGAGAATATCATTGATGCCACAGAAGATTTTGACAACAAATATCTCATTGGAGTTGGAGGATGTGGATCTGTTTATAGAGCTGAATTGCCATATGGTGAAGTTGTTGCTGTGAAAAAACTCCATTCAATACCAAATGAGGAATCATGTGTTCTCAAAGCTTTCCAAAGTGAGATAAAAGCTTTGACAAAAATTCGGCATCGTAACATTGTGAAGCTATATGGGTTTTGTTCACATTCTCTACACTCAATTTTGGTTTATGATTTGGTGGAAAGAGGTAGCATTGATAAGATCCTCCAAAATGATGCACATGCCAATGAATTTCATTGGAAAAGAAGGGTGAATGTTGTTAAAGGAGTTGCTAATGCATTGAGCTATATGCACCATGATTGTTCACCTCCTATAATTCATAGAGACATATCATCAAAGAATGTCCTTTTAGATTTGGATTATGAAGCTCATGTTTCTGATTTCGGAACAGCTAAGTTTCTTAATCCAGATTCTTCAAATTTAACCTCATTTGCAGGCACTTATGGATATGTTGCTCCAGAACTTGCATATACTATGGAAGTGAATGAGAAATGTGATGTTTACAGCTTTGGGGTATTTGCTTTGGAAGTAATATTTGGAAAGCATCCTGGAGAAATTATATCATCTACAATGTTATCATCTTCTTTCGGAGTTAACAATTTCCCAGTGAATGATAATTTGGATCAACGTCTTCCTCATCCTATGAAGCCAACTGATAAGGAAATTATATCAATACTTAGAATAGCAACTTCATGTTTGAGAGAAAATCCACATTCTCGACCTACCATGGAATGTGTAGTGAAGGAACTCTTGATACCTAATGCAGCTTGA 3093 0.3547 MAFIFPNISLMGLFAFLIASLSHTTSAAMQRESEANALLNWKASLDNQSQVSLSSWYGNNPCSNWVGIHCDESKSVSNISLRDMGLRGMLHSLNFSSFPNIHVFDFSSNFLSGRIPPTLGNLSNLRELYLYNNTLSGPIPSEIGLISSMQDLDFSDNFLFGRIPATLGNLSNLQNLYIYNSTLSSSIPDEVGKLYSLTGMHLSHNNLSGSIPISVGNLVNLDNLFLFTNKLSGPIPFTIGNLTKLKYLSLYSNNLSGSIPLSIGNLVNLEKLILYTNKLSGPIPFTIGNLTKLNYLSLYSNNLSGSIPHSIGNLVNLESLSLSRNKLSGPIPFTIGNLTKLKYLILLSNKLSESIPPTFENLTHLESLQLSGNHLIGHLPHNICLGGKLTNFSADNNNFTGPIPKSLKNCSSLIRVRLDQNQLTENMTQCTFECPNLDYIDLSDNNLYGNLSPNWGKCYKLTSLKICDNNLSGVIPQELGEATNLRELHLSSNHLIGQIPKELGKLTLLIKLLISSNFLSGNVPIEIASLRDLRNLALAENDFSGFITKQLGSLPNLLELNLSYNKFVGHIPVEFGKFKQLQSLDLSKNFFAGKIPFILGKLKYLETLNLSHNNLSGTIPSDFDDMLSLTNVDISYNQLEGPLPNIPAFQKASINALRNNKGLCGKISGLEPCPPTSSRKYHHHQNTKVIVLVLSISLSILLLMLLVFFISSRLHRSATTNENQVVEPQNQNLFAIWSYDGKMVYENIIDATEDFDNKYLIGVGGCGSVYRAELPYGEVVAVKKLHSIPNEESCVLKAFQSEIKALTKIRHRNIVKLYGFCSHSLHSILVYDLVERGSIDKILQNDAHANEFHWKRRVNVVKGVANALSYMHHDCSPPIIHRDISSKNVLLDLDYEAHVSDFGTAKFLNPDSSNLTSFAGTYGYVAPELAYTMEVNEKCDVYSFGVFALEVIFGKHPGEIISSTMLSSSFGVNNFPVNDNLDQRLPHPMKPTDKEIISILRIATSCLRENPHSRPTMECVVKELLIPNAA* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1125 1030 SUPERFAMILY L domain-like 50 261 - -
Lan13g1125 1030 ProSiteProfiles Protein kinase domain profile. 755 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1125 1030 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 159 - -
Lan13g1125 1030 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 127 274 - -
Lan13g1125 1030 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 231 1026 - -
Lan13g1125 1030 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 102 206 - -
Lan13g1125 1030 Gene3D Ribonuclease Inhibitor 337 682 IPR032675 -
Lan13g1125 1030 Gene3D Phosphorylase Kinase; domain 1 715 833 - -
Lan13g1125 1030 SMART LRR_typ_2 290 314 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 338 361 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 122 146 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 554 577 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 242 266 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 194 218 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 362 386 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 602 625 IPR003591 -
Lan13g1125 1030 SMART LRR_typ_2 483 506 IPR003591 -
Lan13g1125 1030 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 127 274 - -
Lan13g1125 1030 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 231 1026 - -
Lan13g1125 1030 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 159 - -
Lan13g1125 1030 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 102 206 - -
Lan13g1125 1030 SUPERFAMILY L domain-like 408 665 - -
Lan13g1125 1030 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Lan13g1125 1030 SMART LRR_sd22_2 122 154 - -
Lan13g1125 1030 SMART LRR_sd22_2 290 316 - -
Lan13g1125 1030 SMART LRR_sd22_2 602 625 - -
Lan13g1125 1030 SMART LRR_sd22_2 338 364 - -
Lan13g1125 1030 SMART LRR_sd22_2 242 263 - -
Lan13g1125 1030 Gene3D Transferase(Phosphotransferase) domain 1 834 1028 - -
Lan13g1125 1030 Pfam Leucine Rich Repeat 484 506 IPR001611 GO:0005515
Lan13g1125 1030 Pfam Leucine Rich Repeat 605 624 IPR001611 GO:0005515
Lan13g1125 1030 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Lan13g1125 1030 Gene3D Ribonuclease Inhibitor 268 336 IPR032675 -
Lan13g1125 1030 Gene3D Ribonuclease Inhibitor 195 267 IPR032675 -
Lan13g1125 1030 ProSitePatterns Tyrosine protein kinases specific active-site signature. 879 891 IPR008266 GO:0004672|GO:0006468
Lan13g1125 1030 Pfam Protein kinase domain 757 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1125 1030 Pfam Leucine rich repeat 532 589 IPR001611 GO:0005515
Lan13g1125 1030 Pfam Leucine rich repeat 268 327 IPR001611 GO:0005515
Lan13g1125 1030 SUPERFAMILY RNI-like 187 496 - -
Lan13g1125 1030 SUPERFAMILY Protein kinase-like (PK-like) 738 1024 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1125 Lan-Chr13 16779874 16821030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1125 17 927 Receptor kinase-like Gene Family AT4G08850 45.711 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan13g1125 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1125 - - lang:109325562 1977.99