Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1123 ATGAATAGGGGAATTGAAGTTCTATCTCTAGCTTCCCATCTCCAAAATTCCAATTGGTTGTTCCAGGAAAGCAAAGGAGGAGCCCAATGGACACCACAAGAGAACAAGTTGTTCGAAAATGCTTTGGCTTTCTACGATAAGGACTCGCCGGATCGATGGCTGAGAGTGGCAGCCATGATTCCAGGCAAAACTGTTGCTGATGTGATCAAACAGTACAAGGAATTGGAAGAAGATGTAAGTGTCATTGAAGCAGGTTTAATCCCAGTTCCTGGTTATAGTACTAGTTCCTTCACACTAGAGGGGATTGAGGTCGACAATCACGGATTCGATGGGTTCGAGCAGTTCGAGCAGTTCGAGCAATTTTATAGTGTTGGTGGGAAAAGGGGTGCTTCCACTAGGCCATCTGAGCAGGAAAGAAAGAAAGGAGTGCCATGGACTGAAGAAGAGCACAGATTATTTCTGCTTGGTCTTAAGAAGTATGGCAAAGGGGACTGGCGAAACATCTCTCGGAAGTTTGTGACGACAAGGACACCAACTCAAGTTGCAAGTCATGCTCAGAAGTATTTTATTCGGCAGCTTACAGGAGGCAAGGATAAGAGGAGATCCAGTATCCATGATATCACAATGGTCAATCTCTCGGAAACAAAATCGCCTTCATCGGACAGTGACAGGCCTCATTCTCCCGATCACTCAGCCAACGCTGCGAATCAGCAGCAGAATCAGAAATTGTCTAGCATGATCAAACAAGAATATGACTGGAACTTACCATATAAGAGCATGCCAATGGTTTTCAATTCGACGAATGGAAACAAGTTTGATGCACCAATGCTTGGGATTTCTTCATATGGATTGAAACAACAAGAGCATAGTTTACTCAGAGGCACTCTCCATGGTGGCCAATTTGGACCTTATAATACTATTTTGTAA 927 0.4401 MNRGIEVLSLASHLQNSNWLFQESKGGAQWTPQENKLFENALAFYDKDSPDRWLRVAAMIPGKTVADVIKQYKELEEDVSVIEAGLIPVPGYSTSSFTLEGIEVDNHGFDGFEQFEQFEQFYSVGGKRGASTRPSEQERKKGVPWTEEEHRLFLLGLKKYGKGDWRNISRKFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLSETKSPSSDSDRPHSPDHSANAANQQQNQKLSSMIKQEYDWNLPYKSMPMVFNSTNGNKFDAPMLGISSYGLKQQEHSLLRGTLHGGQFGPYNTIL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1123 308 Pfam Myb-like DNA-binding domain 144 189 IPR001005 -
Lan13g1123 308 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 11 289 IPR043363 -
Lan13g1123 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 193 IPR017930 -
Lan13g1123 308 ProSiteProfiles SANT domain profile. 25 80 IPR017884 -
Lan13g1123 308 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 140 192 IPR006447 GO:0003677
Lan13g1123 308 Gene3D - 143 193 - -
Lan13g1123 308 SMART sant 26 78 IPR001005 -
Lan13g1123 308 SMART sant 141 191 IPR001005 -
Lan13g1123 308 Gene3D - 22 89 - -
Lan13g1123 308 SUPERFAMILY Homeodomain-like 29 83 IPR009057 -
Lan13g1123 308 MobiDBLite consensus disorder prediction 211 242 - -
Lan13g1123 308 SUPERFAMILY Homeodomain-like 138 192 IPR009057 -
Lan13g1123 308 CDD SANT 30 75 IPR001005 -
Lan13g1123 308 ProSiteProfiles SANT domain profile. 145 193 IPR017884 -
Lan13g1123 308 CDD SANT 144 189 IPR001005 -
Lan13g1123 308 PANTHER MYB TRANSCRIPTION FACTOR MYB51 11 289 - -
Lan13g1123 308 ProSiteProfiles Myb-like domain profile. 137 189 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1123 Lan-Chr13 16745380 16747975 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan13g1123 Myb_DNA-binding 2.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1123 - - var:108329798 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1366 7 18866735 18869039 Lan13g1123 13 16745380 16747975 LSH