Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1105 ATGGCCAAATTTCTTCAACTTTTCTCTATACTACTCCTATTACTTTTGATCCCAGTTTCATCTCAGATTGACCAAGTTTTATACACTGGATTCAAGGACATAGGTGCCAACAATCTAACCTTGAATGGTGTAGCAGAAATTGAGAAAAATGGTATATTGAGATTAACAAATGATACTAGCAGATTAATAGGACATGCTTTTTTCCCAACACCCTTTGAGTTCAAGAACTCAACTACAGGTAAAGTTTTATCCTTTAGTACTTCATTTGCTCTTGCAATTGTTCCTGAGTATCCAAAACTAGGTGGGCATGGCCTTGCTTTTGCAATAGTACCTTCTAAGGATCTTAAATCTCTACCTAGTCAATATCTTGGTCTTCTTAATTCATCTGATATTGGTAACTTTTCTAATCATCTTTTTGCTGTTGAGTTTGATACTGTTCAAGACTTTGAGTTTGGTGATATAAATGATAACCATGTTGGAATTGATATCAATAGCTTGCAGTCCAATGCATCTGTTACTGCAGCTTATTACATTGATGATTCAACTAAGCAAAATCTCACACTCAAAAGTGGTAAAACAATACTAGCTTGGGTTGATTATGATTCTTCACAAAGCCTTATTAGTGTTACTATTTCACCAACTTCTTCCAAACCCAAAAAACCAATCTTGTCCTATGTTATGGATCTTTCAACAATATTTCATGATACTATGTATGTTGGGTTTTCTGCATCAACTGGTTTACTTGCTAGCTCTCATTACATCATGGGTTGGAGCTTTAAGATGAATGGACCAGCACCAACACTTGATCTTTCTTCTCTGCCACAACTTCCAGGACCGAAGAAGAAACAAACTCCTATGATTATAGGTGTTTCTGTCTCAGTTTCTGTCATTGCATTATGTGTTGTATTCATTGGGATTTACCTGTTCTGGAAAATCAAGAATGCTGATGTTATAGAACCATGGGAGCTTGTAATTGGTCCACATAGATACTCCTACCAAGAACTCAAGAAAGCTACAAAAGGTTTCAAGGACAAGGAGTTACTTGGGCAAGGTGGATTTGGCAAAGTTTTCAAAGGAACATTGCCTAATTCAAGGACTGAAGTTGCTGTCAAGAGAGTCTCACATGAGTCAAAACAAGGCCTTAGGGAATTTGTATCCGAAATCGCAAGCATAGGCCGGCTTCGCCATAGGAACTTGGTTCAGCTATTAGGATGGTGTCGTCGCCGCGGCGACCTCTTACTAGTATACGATTTCATGGCCAATGGAAGCTTGGACAAGTACTTATTTGATGACCCTAAAATTGTCCTAAGTTGGGGACAAAGATTCAAGATAATCAAGGATGTTGCTTCAGCACTATTATACCTACATGAAGGGTATGAGCAAGTAGTTATCCATAGAGATGTTAAGGCTAGCAATGTGTTACTAGATTTTGAACTCAATGGAAGACTAGGTGATTTTGGATTAGCAAGATTGTATGAACATGGTGCTAACCCAAGCACCACAAGGGTAGTTGGTACCTTAGGCTATTTAGCACCAGAATTACCTAGAACAGGAAGAGCAACAACAGGCTCAGATGTTTTTGCATTTGGTGCACTTTTGCTTGAGGTAGCATGTGGTAGAAGACCAATAGAACCAAAGGCATTACAAGAAGAGTTGGTTTTGGTGGATTTGATATGGGAGAGGTACAAAGAAGGTAGAATACTTGATGTTGTTGATCCAAAACTACATGGTAATTTTGATGAAAATGAGGTTTTGGTTGTGATAAAACTAGGAATGATATGTTCAAATGATGATCCTAATGTTAGGCCTAGTATGAGACAAGTTATGAGGTATTTGGATGGAGAAGTTGAACTTCCACATGAGTTTAGAAAACCAGGTGATGTAACTCATCATGAAGGCTTTGATGAGTTTTTGCATTCACTTGCATCATCTTCTTTTGATAACATGAGTTCAGGATCATATTTTGGTAATAATAGAGAAATGGATAAGAGTTTTCCTTCTTTTGTTAATTCACCTCATTCTCTTCTCCATGATAGAGGAGAAACAAGGTGA 2052 0.3767 MAKFLQLFSILLLLLLIPVSSQIDQVLYTGFKDIGANNLTLNGVAEIEKNGILRLTNDTSRLIGHAFFPTPFEFKNSTTGKVLSFSTSFALAIVPEYPKLGGHGLAFAIVPSKDLKSLPSQYLGLLNSSDIGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINSLQSNASVTAAYYIDDSTKQNLTLKSGKTILAWVDYDSSQSLISVTISPTSSKPKKPILSYVMDLSTIFHDTMYVGFSASTGLLASSHYIMGWSFKMNGPAPTLDLSSLPQLPGPKKKQTPMIIGVSVSVSVIALCVVFIGIYLFWKIKNADVIEPWELVIGPHRYSYQELKKATKGFKDKELLGQGGFGKVFKGTLPNSRTEVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDDPKIVLSWGQRFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTGSDVFAFGALLLEVACGRRPIEPKALQEELVLVDLIWERYKEGRILDVVDPKLHGNFDENEVLVVIKLGMICSNDDPNVRPSMRQVMRYLDGEVELPHEFRKPGDVTHHEGFDEFLHSLASSSFDNMSSGSYFGNNREMDKSFPSFVNSPHSLLHDRGETR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1105 683 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Lan13g1105 683 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1105 683 Pfam Legume lectin domain 27 273 IPR001220 GO:0030246
Lan13g1105 683 PANTHER - 3 663 - -
Lan13g1105 683 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 3 663 - -
Lan13g1105 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 281 IPR013320 -
Lan13g1105 683 SUPERFAMILY Protein kinase-like (PK-like) 323 637 IPR011009 -
Lan13g1105 683 Gene3D - 27 271 - -
Lan13g1105 683 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Lan13g1105 683 ProSiteProfiles Protein kinase domain profile. 342 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1105 683 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1105 683 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Lan13g1105 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lan13g1105 683 Gene3D Transferase(Phosphotransferase) domain 1 419 628 - -
Lan13g1105 683 CDD STKc_IRAK 348 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1105 Lan-Chr13 16475079 16477490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1105 19 668 Receptor kinase-like Gene Family AT3G55550 60.212 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan13g1105 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1105 - - gmx:100784346 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1749 11 34081833 34084185 Lan13g1105 13 16475079 16477490 LSH