Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1104 ATGTTTCTCAAGCTTGTAGCAGTGTTGTTTTTGTTGGTAACAGTAGTAACCAGTGAAAATACTAGTTTCTTCTATAATGGTTTCAAATCAACTCAATTATTATATCTTGATGGAATTGCTGAATTCACTTCTAATGGCCTTCTTAAACTCACCAATGATACCAAACAACAAAAGGGTCATGCTTTCTATCAAAATCCTATGGTTTTCAAGAACAATATCAATGAAACTGTGTCTTCTTTCTCTACTACTTTTGTCTTTGCCATAAGATCTGAGTACCCTAATCTGAGTGGCCATGGAATTGTGTTTGTAGTTTCTCCAACAAAAGGGCTTCCAAATTCTCTTCCAAGTCAGTACCTTGGCCTATTCAATGAGACAAACAATGGTAACAGCACCAACCATGTTTTCGGCGTCGAAATCGATACCATTCTAAGCAGTGAATTTGATGATATCAATGACAACCATGTTGGAATTGATATCAATGGCCTGAAGTCAGAAAAATCAGCTTCTGCAGGGTATTACGATCGCGGCGAGTTTACGAATTTGAGTCTCATTAGTGGAAATCCAATCCAGGTATGGGTAGAATATGATGGTGTGAAGAAGCAAATTGATGTTACTTTAGCTCCAATCAACTATAACAAACCAGAAAAGCCTTTGTTATCATTGATCAAAGACCTTTCTCCAATTCTAAACAGTACTATGTATGTTGGATTTTCATCTTCTACTGGCTCAGTTTTAACTTCTCATTATGTTCTTGGTTGGAGTTTTAAGATCAATGGAAAATCTCAAGAACTTGTAATTTCTGAACTACCTAATCTTCCTAGACTAGGTGATAAAAAAGTGTCTAAGGTTATCACTATAGGATTGCCTCTAATATCAATTAGTTTGGTTCTTTTGGTAACTCTAGGAATAGTTCATTTCATCAAAAGGAAGAAGAAGTTTTCGGAGTTGCTCGAAGATTGGGAACAGGACTATGGTCCTCATAGATTCAAGTACAAAGATCTTTACTTCGCCACGAAAGGGTTTGGAGAGAATGAGCTATTAGGAAGTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCGATTTCAAAAATCGAGGTTGCGGTAAAGAAGGTGTCTCATGAATCAAGGCAAGGGATGAAGGAATTCGTAGCTGAAATCGTTAGCATCGGTCGCCTTTGTCATAGGAATCTAGTCCCCCTTCTCGGCTATTGCAGGCGCAGAGGAGAATTGCTTTTGGTTTATGATTACATGCCTAATGGAAGCCTAGACAAGTATCTCTATAACAAACCAAGAGTGACCCTTAATTGGAGCCAGAGGTTTCGTATCATCAAAGGCATCGCTTCGGGTTTGTTCTATCTACACGAAGAATGGGAGCAAGTTGTAATCCACAGAGACATTAAGGCCAGCAATGTGCTACTAGACTCCGAATTGAATGGTAGATTAGGTGACTTTGGTCTTGCAAGGTTGTATGATCATGGCACTGATCCTCAAACTACTCATATTGTTGGAACTCTTGGCTACCTTGCACCTGAGCATACTAGAACAGGTAAGGCCACAAAAAGTTCCGATGTGTATGCTTTTGGCGCGTTTCTATTGGAAGTTACTTGTGGAAGGAGGCCTATAGAGCAAGTAAGGGAATGTGAGAGTGTAATATTGGTTGATTGGGTTTTTGATTGTTGGAAAAGGGGTGAGATAATTGAGGCAAAGGATCAAAATTTGGGTCATGATTATAGGTTGGAAGAGGTGGAGTTAGTGTTGGAACTTGGTTTGTTGTGTTCACATTCTGAGCCTTTGGCTAGGCCAAGTATGCGCCAAGTTGTGCAATATTTAGAGAGGGAAGTGACTTTGCCAGATTTGTCTTTGCTTACATTATCTTCCAATGGCTTAACTTTTGGGCACCATGAAAATTTTCAGGACTTTCCAATGTCATATCCTTCTTCCATGGATAGATCATTTTCTCATAATTCTTCTGTTTCTGAGTCACTTCTCTCTGGTGGTCGTTGA 2007 0.3931 MFLKLVAVLFLLVTVVTSENTSFFYNGFKSTQLLYLDGIAEFTSNGLLKLTNDTKQQKGHAFYQNPMVFKNNINETVSSFSTTFVFAIRSEYPNLSGHGIVFVVSPTKGLPNSLPSQYLGLFNETNNGNSTNHVFGVEIDTILSSEFDDINDNHVGIDINGLKSEKSASAGYYDRGEFTNLSLISGNPIQVWVEYDGVKKQIDVTLAPINYNKPEKPLLSLIKDLSPILNSTMYVGFSSSTGSVLTSHYVLGWSFKINGKSQELVISELPNLPRLGDKKVSKVITIGLPLISISLVLLVTLGIVHFIKRKKKFSELLEDWEQDYGPHRFKYKDLYFATKGFGENELLGSGGFGRVYKGVMPISKIEVAVKKVSHESRQGMKEFVAEIVSIGRLCHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNKPRVTLNWSQRFRIIKGIASGLFYLHEEWEQVVIHRDIKASNVLLDSELNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPEHTRTGKATKSSDVYAFGAFLLEVTCGRRPIEQVRECESVILVDWVFDCWKRGEIIEAKDQNLGHDYRLEEVELVLELGLLCSHSEPLARPSMRQVVQYLEREVTLPDLSLLTLSSNGLTFGHHENFQDFPMSYPSSMDRSFSHNSSVSESLLSGGR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1104 668 Gene3D Transferase(Phosphotransferase) domain 1 418 624 - -
Lan13g1104 668 Gene3D - 18 270 - -
Lan13g1104 668 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1104 668 CDD lectin_legume_LecRK_Arcelin_ConA 21 259 IPR001220 GO:0030246
Lan13g1104 668 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1104 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 276 IPR013320 -
Lan13g1104 668 PANTHER - 2 664 - -
Lan13g1104 668 SUPERFAMILY Protein kinase-like (PK-like) 322 623 IPR011009 -
Lan13g1104 668 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 2 664 - -
Lan13g1104 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lan13g1104 668 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Lan13g1104 668 Pfam Legume lectin domain 21 269 IPR001220 GO:0030246
Lan13g1104 668 CDD STKc_IRAK 347 613 - -
Lan13g1104 668 Pfam Protein kinase domain 343 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1104 668 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1104 Lan-Chr13 16466426 16468658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1104 17 668 Receptor kinase-like Gene Family AT2G37710 64.733 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan13g1104 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1104 - - gmx:100802293 1018.84