Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1098 ATGAAGAGAGGTGAGTTGAACCTAGATAATGATTTAGATCCTCACCATGAAGATGTTTTCCAAACTGATGATGAAGAAAACCAAGCATATAGAGTCTTTGAAAATTTAAGTGATGATTCTGATTCAGAAAATAATTCACCACCTTCAAAAAATTTGTCTAATGAGATTGCTATTAGTACTTCATGGCCTCAAAGTTATAGGACATCTATGGAACTGTTAACTAGTGTAACAGTACCAGGAGGAGTTAGTTTCCTAAGCAGAAATGCTTCAAAAGGGACAAGTGACTCTTTCTTTAAGGGACTTGAGACATGGCAAGATGATGATTCTTTATTCACTAAACCTCTTGTTTCTGAGGACCCTTCCTCAAAGAAGCAATGTTCATTTGCACAATCAGTCATTAATGGAATCAATATCTTATGTGGGGTAGGAATACTCACAATACCATATGCTGTAAAAGAAGGAGGGTGGTTAAGCCTTATTATACTTCTAGTATTTTCTATAATTTGCTGTTATACTGGGATCTTATTGAAGAGGTGTTTGGATAATTACCCTGAACTCGAAACCTTCCCAGACATTGGCCAGGCTGCATTCGGAATTGCTGGTCGATTATGTATCGCGATAATTTTGTTCATGGAACTTTATGCTTCTTGTGTTGAGTATATAACACTAATGAGTGATAACCTCTCATCACTATTTCCTAATGCGAATGTGACATTCGGCGGGGCTGACATTGGAACTCATCAAGTTTTTGCAATCACAGCCGCGATTCTTGTTCTTCCAACAGTTTGGATAAAAAATCTAAGCCTGCTTTCCTATGTTTCAGTTGGAGGAATATTTGCAACAATTTTGGTCACACTATGCTTGTTTTGGGTTGGAATAGCAGATCAAGTTGGATATAAGCCAGGAGCAAAAGTTTTTGACCTTGCAAACCTATCTGTCGCAATCGGTATCTACGGTTTTGGCTTCGGTGGCCATGCAGTTTTTCCTAGTATCTACTCTTCCATGAAGGAACCAGCAAATTTCCAATCAGTTCTATATGTCAGCTTTGCCTTTTGTCTTGCTATGTACACAGGAGTAGCTGCAATGGGCTATTTAACATTTGGTGACGCGGTCGAATCTCAATTTACCTTAAACATGCCGCAAGAATTATATGCATCCAAGATTGCAGCCTGGACAACTATTGCGACCCCGTTGGCGAAATATGCCTTAACATTATTACCGATTGCAATGAGCATAGAGGAACTTGCGCCGACTCCTCAGTTAAGATGTCATGCTATGTCTGTTGTTGTCAGAACAGTTCTAGTGATTACAAGTTTAATTGTTGCCCTCAGTGTTCCATATTTTGGTTCTTTGATGGCACTGATTGGTTCTTTCATGTCAATGCTAGTTGCACTTATTTTTCCTTGTCTATGTTATCTCAAGTTACACAGTGGCAGATTATCAAAAATACAGATAATAAATTGCATTTTGATTATTATTGTTGGTGTGGTAAGTGGTTGTGCTGGAACATATTCAGCAATGTCAAAAATAATCAATGGAGAGGGCTAA 1548 0.3831 MKRGELNLDNDLDPHHEDVFQTDDEENQAYRVFENLSDDSDSENNSPPSKNLSNEIAISTSWPQSYRTSMELLTSVTVPGGVSFLSRNASKGTSDSFFKGLETWQDDDSLFTKPLVSEDPSSKKQCSFAQSVINGINILCGVGILTIPYAVKEGGWLSLIILLVFSIICCYTGILLKRCLDNYPELETFPDIGQAAFGIAGRLCIAIILFMELYASCVEYITLMSDNLSSLFPNANVTFGGADIGTHQVFAITAAILVLPTVWIKNLSLLSYVSVGGIFATILVTLCLFWVGIADQVGYKPGAKVFDLANLSVAIGIYGFGFGGHAVFPSIYSSMKEPANFQSVLYVSFAFCLAMYTGVAAMGYLTFGDAVESQFTLNMPQELYASKIAAWTTIATPLAKYALTLLPIAMSIEELAPTPQLRCHAMSVVVRTVLVITSLIVALSVPYFGSLMALIGSFMSMLVALIFPCLCYLKLHSGRLSKIQIINCILIIIVGVVSGCAGTYSAMSKIINGEG* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1098 515 PANTHER OS05G0424000 PROTEIN-RELATED 106 512 - -
Lan13g1098 515 Pfam Transmembrane amino acid transporter protein 126 504 IPR013057 -
Lan13g1098 515 PANTHER AMINO ACID TRANSPORTER AVT1F-RELATED 106 512 - -
Lan13g1098 515 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1098 Lan-Chr13 16412279 16416203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1098 6 512 Amino Acid or Auxin Permease AAAP Family AT5G02180 49.909 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1098 K15015 - qsu:112025453 565.074