Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1097 ATGGTTGAGTCAACCATGTCAAAGACAATGATGGAAGAAGTAGTAATGGCTGCTACTTGGTCAAATGGGTCAGAAGATCATGATGATGATGATGAACTTGTTAGAGAGCTTTTAGATGATGTGTCTCCACTTCTTATGATGCCACAAGTGTCAAATGAGCACAATATAATTTGTGCATCATCTTCAAGTGATGAACATGCTATTAATAAGTTTCTATCCAACATTTATTCAGGACCTACAATCCTAGATATTGAAAATGCTTTATCAGTGACCAACCATAGAGAGCATTTTCAACATATCTCACCACCTAGTGTTTCGTTATTGGAAAGGAGTTTGGGTAAGATTGAGAATAAATACACCTTGAAAGTCAAGTGCTTTGGCAATGGTCTGGGTGATGATGGCTATAAGTGGAGGAAATATGGCCAGAAATCTATTAAGAATAGTCCAAATCCTAGGAGCTACTATAGGTGCACCAATCCAAGGTGCAGTGCCAAGAAACAGGTTGAAAGATCCAATGAGGACCCAGACACACTTATCATCACTTATGAAGGGCTCCACCTTCACTTTGCTTACCCATACTTCCACATGGGCCAGCCTCAGCAGCCTTATAATCCACCAATTAAGAAGTTAAAGCCCAACTATTTACATCAAGAAGCCCAAGCCCATGAAGCCCATCATACACAAGAAGCCCATGAATCTCAAGTCAATGCTACTTTTGGACTCACATCATCAACTTTACTAGACTCTCAACAAGATATAGGTCAAGAAACTTTGGGTTCAAAAGGGTTACTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAATGAAGGTCACCCAAAATTTTCTTGTTCCTCATTCCCTTCTCCTCCAATATCTCCTCCTTCTCTTTGGCCTTCAAATTTCCCTAACTCTTCTTATACTATGGGCTTAAATTCTAGCACCTAG 951 0.3996 MVESTMSKTMMEEVVMAATWSNGSEDHDDDDELVRELLDDVSPLLMMPQVSNEHNIICASSSSDEHAINKFLSNIYSGPTILDIENALSVTNHREHFQHISPPSVSLLERSLGKIENKYTLKVKCFGNGLGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFHMGQPQQPYNPPIKKLKPNYLHQEAQAHEAHHTQEAHESQVNATFGLTSSTLLDSQQDIGQETLGSKGLLEDMVPFMVRNPTNEGHPKFSCSSFPSPPISPPSLWPSNFPNSSYTMGLNSST* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1097 316 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 26 283 - -
Lan13g1097 316 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 283 IPR044810 GO:0003700
Lan13g1097 316 Gene3D WRKY domain 127 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan13g1097 316 SMART WRKY_cls 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan13g1097 316 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan13g1097 316 SUPERFAMILY WRKY DNA-binding domain 130 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan13g1097 316 ProSiteProfiles WRKY domain profile. 126 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1097 Lan-Chr13 16388103 16391275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1097 20 278 WRKY Transcription Factor Family AT5G43290 41.636 8.52e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan13g1097 WRKY 6.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1097 - - gmx:100810459 395.201