Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1094 ATGATAATGGACCCAAGTCTTGATCGGATTAATGCTTCCTTAAACGAAAACCGGTTTGGGAATCAGTCTGTGCCAATTCTGCAGAATCAGAGATATGAAAATGGTTTCTTTGATCAAACTAGGGAATTTGGTTACCTTCAGTCCAATCTAATGCCTGCTGATACACCTTCGTCCTCAATTTTGACACACGAGGAACCTTCTCTAGAGGATTGTGATTTTTCTGATGCAGTTTTGAGATACATTAGTCAGATCCTCATGGAAGAAGATATGGAAGATAAGACAGACATGCTTCAGGATTCTTTGGATCTTCAAGTTGCTGAGAAATCATTCTATGAGGTAATAGGCGAAAAGTACCCGCATTCGCAATTAGGAAATCAAAGTTTTATTAATCCAAATGATGGAGGTGGAGATCATAACTTTTCTGAAAATTATGGTAGTTTTCATGGTAATGATGGTGATCTCAGTAGCATTTTTAGTACCAACAATTCAATCCTTGGAAACTTAGGTCAAGTTCCTCACCGAAATTTTCTAGGCTATAGCAACATTTCACAATCCTCTTATAGCTCTTCAAATAGTGTAAGAAGTAGTGTAGAAGTGCATTTGGACTCTCCGAGCAGTATTGTTCAGATGCCTGATCTGAACAGTGAGAATCAATCCATTTGCCAATTTCAAAAGGGTGTTGAAGAGGCTAGTAAGTTTCTTCCAAGTGGAAATCAGCTCTTTGCTAATTTGGATGTAGCTAATTTTTCACGACTAGTGCCTAAAGTGGGGATCGGGACTGATAAGTCTTCGGTTAAGGTGGAGAAGGATGAGGGGGAGTCTTTTCCTGACGGATCGAAGGGGAGGAAGCATCCTCACATGGAAGAGGAAGATGTTGAAGAAAATAGAAGCAGCAAGCAAGCTGCAGTTTACTCAGAACCTACATTGCGGTCGACTATGATGGATATAATCCTGCTTCATAGCACGGGAGATGGCAAGAACCATTATATGGCTCGTCGAGAGGCTTTGCAGAATAAGAACAACAAGATAGTGCTGCCAAATGGTAAATCAAAAGCTTCCAATAGCGGTAAGGGACGTGGTGGTAAGAAACAAAATGGGAAAAAGGAAGTGGTCGATTTGAGAACACTTCTTATTCTTTGTGCACAAGCTGTTGCAGCGGATGACAATAGAAGTGCACATGAGTTTCTAAAACAGGTCAGACAGCACTCAAGTCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTCGCCGATGGCCTTGAGGCACGCTTGGCTGGTACCGGAAGCCAAATTTATAAAGGACTTGTAAGTAAAAGAACATCAGCTGCTGATTTTCTGAAAGCTTATTATCTGCTCATCGCAGCTTGCCCTTATAGGAAGATGTCTAGTTTTGTTTCAAACGTCACAATAAGGAAATCTTCAACAAATTCAATGAGGGTCCATGTTATAGATTTCGGTATCCTTTATGGTTTCCAGTGGCCTACTTTTATACAGAGACTTTCATGGAGACCCGGTGGACCACCAAAACTTCGGATTACAGGAATAGACTTCCCGCAACCTGGTTTCAGGCCTGCGGAAAGAATTATAGAAACTGGACGCCGCTTGGCTGCTTATGCTGAAAGTTTTAATGTGCCATTTGAGTACAAGGCTATAGCGAAAAAATGGGAAACAATTCAACTTGAGGAACTTAACATTGATAGGGACGAGTACCTTGTTGTTACCTGTTTTTATAGAGGTAAAAACTTGCTGGATGAATCTGTGGTAGTAGACAGTCCAAGGAACAAATTCCTCAGTTTGATAAGGAAAATCAACCCAGATATATTCATTTATGGCATTCTTAATGGAGCCTTTAATGCCCCTTTCTTTGTTACTAGATTTCGGGAGGCACTGTTTCACTTTTCTTCACTATTTGATATGCTTGATACTATTGTGCCTCGTGAGGACTGGGAGAGGATGCTGATTGAGAAAGAGATACTTGGGAGAGAAGCATTGAATGTTGTCGCATGTGAAGGCTACGAGAGAGTAGAGAGGCCCGAGACGTATAAGCAGTGGCAAGTCCGTATTCTAAGAGCCGGATTTTCGCAACAAGCTTTTGATCGTGAGATAGTACAGACAGCGATGAAGAAAGTAAGGTCCAGCTTCCACAAAGATTTTGTAATGGATGAAGATAGCCACTGGTTGTTGCAAGGTTGGAAGGGGCGAATCATTTACGCACTTTCTTGTTGGAAACCTGCATGA 2241 0.4145 MIMDPSLDRINASLNENRFGNQSVPILQNQRYENGFFDQTREFGYLQSNLMPADTPSSSILTHEEPSLEDCDFSDAVLRYISQILMEEDMEDKTDMLQDSLDLQVAEKSFYEVIGEKYPHSQLGNQSFINPNDGGGDHNFSENYGSFHGNDGDLSSIFSTNNSILGNLGQVPHRNFLGYSNISQSSYSSSNSVRSSVEVHLDSPSSIVQMPDLNSENQSICQFQKGVEEASKFLPSGNQLFANLDVANFSRLVPKVGIGTDKSSVKVEKDEGESFPDGSKGRKHPHMEEEDVEENRSSKQAAVYSEPTLRSTMMDIILLHSTGDGKNHYMARREALQNKNNKIVLPNGKSKASNSGKGRGGKKQNGKKEVVDLRTLLILCAQAVAADDNRSAHEFLKQVRQHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYYLLIAACPYRKMSSFVSNVTIRKSSTNSMRVHVIDFGILYGFQWPTFIQRLSWRPGGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYAESFNVPFEYKAIAKKWETIQLEELNIDRDEYLVVTCFYRGKNLLDESVVVDSPRNKFLSLIRKINPDIFIYGILNGAFNAPFFVTRFREALFHFSSLFDMLDTIVPREDWERMLIEKEILGREALNVVACEGYERVERPETYKQWQVRILRAGFSQQAFDREIVQTAMKKVRSSFHKDFVMDEDSHWLLQGWKGRIIYALSCWKPA* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1094 746 PANTHER SCARECROW-LIKE PROTEIN 9 41 745 - -
Lan13g1094 746 Pfam GRAS domain family 373 744 IPR005202 -
Lan13g1094 746 MobiDBLite consensus disorder prediction 344 367 - -
Lan13g1094 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 745 IPR005202 -
Lan13g1094 746 MobiDBLite consensus disorder prediction 263 297 - -
Lan13g1094 746 MobiDBLite consensus disorder prediction 263 302 - -
Lan13g1094 746 MobiDBLite consensus disorder prediction 344 360 - -
Lan13g1094 746 ProSiteProfiles GRAS family profile. 364 744 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1094 Lan-Chr13 16333001 16336719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1094 69 745 GRAS Transcription Factor Family AT2G37650 54.161 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan13g1094 GRAS 2.4e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1094 - - ccaj:109816616 1136.32