Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1077 ATGGCTGAAGATTCTGGTGAATGGGATGCTGACAAAATGCTTGACTTCTATATTCATGATTATCTTGTGAAAAATAATTTACATGCCTCAGCACAATCTTTTATGACTGAAGCAAACCTTCCTGTTCATAAACCAGCAATGAAGGATGCGCCGGATGGATTTCTTTATGAGTGGTGGTCTGTCTTTTGGGACTTATCCCTCACAAAGATGCAAAAACAATGCTCCGAGTCTGCCTCAGCTTACATCGAGGCTCAGATAGCGAAGGCGAGAGAACATCGACTTCAAATGCAACAATTGCTAGTAATGCAGAAGGACAGTGCACAGTTACAGCAAAGAGATAGTGATCATTCTGTACTAGGTGGTTCCTTAAATGCCATGAACTCTAAGGTAGTGATGGGGCCTCCCGAAGCAAGTGTGTCAGCGACGGAAATGTTCGAAGAACGAATGAAACAACTCAATTCAATGGGTTCAGAGGCATCTTTAACTCCTATGCATACCTATAAAATGGCCTTTCCCAAATCAGCAACAACTCATTACAGGTAA 543 0.4217 MAEDSGEWDADKMLDFYIHDYLVKNNLHASAQSFMTEANLPVHKPAMKDAPDGFLYEWWSVFWDLSLTKMQKQCSESASAYIEAQIAKAREHRLQMQQLLVMQKDSAQLQQRDSDHSVLGGSLNAMNSKVVMGPPEASVSATEMFEERMKQLNSMGSEASLTPMHTYKMAFPKSATTHYR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1077 180 ProSiteProfiles LIS1 homology (LisH) motif profile. 10 42 IPR006594 GO:0005515
Lan13g1077 180 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 7 178 IPR044716 GO:0003714
Lan13g1077 180 Pfam LisH 12 38 IPR006594 GO:0005515
Lan13g1077 180 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 7 178 - -
Lan13g1077 180 SMART Lish 10 42 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1077 Lan-Chr13 16057332 16058387 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Lan13g1077 LisH 1.5e-08 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1077 - - lang:109363640 364.77