LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan13g1073	ATGGACTTGAGGGATACTTGGGTTTTCTTCTTTCTGTTTTCTAACTTTTGGTTTGTCACTTTCTGTGGACAAGATGGTTTCTTGAGTCTATCTTGTGGTGGAACAACCAGTTTCAGTGATTCATCTAACATTTCATGGGTACCAGACATTGCTTACATAACCACAGGGAAGTCAATGACCATCAATTATAGTGATGGTTCCTTGTCAAAAAATGTCTCAGCTCGATTCTTCCCGAAATCGAGAGGTCGCATATGCTATAGAATACCAGTGGACAATGCAACTACATTGATTCTTGTGAGAGCAAAATTTGTATACAAGAACTATGATGGACTTCGAAAACCACCTAAGTTCTATGTTTCTCTTGGAACAGCTATTGCTGCTAATATAAATCTTGCAAAAGATGATCCATGCATAGAAGAATTTCTATGGATAGTCAATAAGGACACACTGCCATTTTGTTTAAATGCGATTCCGAGTTGTGGTTCTCCGGTTATTTCTTCACTTGAAATCAGACCACTTCCTAAAGGATCCTACACAAAAGGCAAAGAAGATTTTCCGAATAAGTTACTTCGGAAGAGTCATCGAATTGATTGTGGTTACACGAATGAGTCTATTCGGTATCCTATGGATCCATATGATAGAATATGGAATGCTGACAGAAGTTTCACACCATTTCATGCTACGGCCGAGTTTAAGATTCATAACAGCTTCAACCAGTCTAATGTCATGGAGAAGCCACCGATTTCTGTTCTTCAAACTGGCAGAGTCTTGATGCGGCGAAACACACTGACATATAACCTCCCTCTTGATGTATTAGGGGACTACTATATCATCCTCTATTTTGCCGGAATTCTTCCAGTGTTCCCCTCATTCGATATATTGGTAAATGGAGATATTGTAAAATCAAACTATACAATAAAGGGCTCAGAAATCAGTGCTTTATATGTTACACTAAAGGGTATCAATAGCTTGAATATAACACTAAGTAGTATCAACTTCTACCCTCAGATCAATGCATTTGAGGTATATAATATGGTTGATATTCCATCTGAAGTCTCCTCAACTACAGTTTCAGCAATGCAGGTTATTCAGCAGTCCACTGGCTTAGATTTAGGATGGCAAGATGATCCATGCTCACCTTTCCCATGGAATCACATTGATTGTGAAGGAAGCCTTGTTACATCATTGGATCTCTCAAACATAAATTTGAGATCAATTGGTCCTACATTTGGTGACTTGTTGGACCTAAAAACACTAGATTTGCATAACACATCACTTGCTGGTGAAATTCAGGATTTGAGTAGCTTGCAACATCTTGAAAAACTGAACCTTAGTTTCAATCAGCTAACATCCTTTGGTGTAGATCTTGATAACTTGATTAACCTTCAAATATTGAACTTGGAAAACAACAAGCTTCAAGGTCCACTTTCTCAGTCTTTGAACAAAGAAACCTTAGATATCAGAACATCAGGGAACTTATGCCTTACTTTTTCCACAACCACATGTGTTGATGCATCATCCAATCCTCCGATTCAGACACCACTAGTGACTATAGTTCGCAAAAAGAAACACAACGAACATAACCATCTACCGATCATAGTAGGCGCGGTTGGAGGAGCTACACTTGCTCTTATCTTGATATGTGTTCTAGTAGTTATATACATAACTAACAAGAGATATGAAGTCTGTCATACAAGAGAAGAAACAGATATGAAGAACTGGGGTCCTGAAAAAGTCTTTAGCTACAAAGAAATCAAAGCAGCTACAAGCAATTTTAAAGAAGTCGTCGGACGGGGAAGTTTTGGATCCGTTTACCTTGGAAAACTTCCAAATGGAAAACCGGTAGCTGTTAAAGTTCGGTTTGACAAATCCCAACTTGGAGTTGATTCTTTTATGAATGAGATACATCTCTTGTCGAAAATCCGCCATCAAAATCTTGTTTCTCTAGAAGGATTTTGTCATGAACCGAAACATCAGATATTAGTTTATGAGTACTTGCCTGGTGGATCCCTTGCTGATCACCTCTATGGTGCAAACCGCCGAAAAACACCCTTAAGCTGGGTTCGAAGGTTGAAAATTGCAGTCGATGCAGCAAAAGGATTGGACTATTTGCATAATGGAAGTGAACCGCGAATCATACACCGCGATATCAAGTGTAGTAACATCCTCTTGGATATGGAGATGAATGCTAAGGTCTGTGACTTCGGCTTATCTAAGCAAGTAACTCAGACAGATGCAACTCATGTCACCACTGTTGTCAAGGGAACTGCTGGGTATCTAGATCCAGAGTACTATTCCACTCAACAGCTGACAGAGAAAAGTGATGTATATAGCTTCGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCATTCCGGAACTCCTGACTCGTTCAACTTGGTGTTATGGGCCAAGCCCTACTTGCAAGCTGGTGCATATGAAGTTGTGGATGAAAGCATACAAGGAACTTTTGATATAGAGAGCATGAGAAAAGCAACATTGATTGCTATAAAATCAGTGGAAATGAATGCTTCACAAAGGCCACTTATTGCAGAGGTATTAGCAGAGCTAAAGGAAGCTTATAGTACACAACTCAGATTCATTGAATCTTGTCAAAATCAGAATTAG	2640	0.392	MDLRDTWVFFFLFSNFWFVTFCGQDGFLSLSCGGTTSFSDSSNISWVPDIAYITTGKSMTINYSDGSLSKNVSARFFPKSRGRICYRIPVDNATTLILVRAKFVYKNYDGLRKPPKFYVSLGTAIAANINLAKDDPCIEEFLWIVNKDTLPFCLNAIPSCGSPVISSLEIRPLPKGSYTKGKEDFPNKLLRKSHRIDCGYTNESIRYPMDPYDRIWNADRSFTPFHATAEFKIHNSFNQSNVMEKPPISVLQTGRVLMRRNTLTYNLPLDVLGDYYIILYFAGILPVFPSFDILVNGDIVKSNYTIKGSEISALYVTLKGINSLNITLSSINFYPQINAFEVYNMVDIPSEVSSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWNHIDCEGSLVTSLDLSNINLRSIGPTFGDLLDLKTLDLHNTSLAGEIQDLSSLQHLEKLNLSFNQLTSFGVDLDNLINLQILNLENNKLQGPLSQSLNKETLDIRTSGNLCLTFSTTTCVDASSNPPIQTPLVTIVRKKKHNEHNHLPIIVGAVGGATLALILICVLVVIYITNKRYEVCHTREETDMKNWGPEKVFSYKEIKAATSNFKEVVGRGSFGSVYLGKLPNGKPVAVKVRFDKSQLGVDSFMNEIHLLSKIRHQNLVSLEGFCHEPKHQILVYEYLPGGSLADHLYGANRRKTPLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDIKCSNILLDMEMNAKVCDFGLSKQVTQTDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAYEVVDESIQGTFDIESMRKATLIAIKSVEMNASQRPLIAEVLAELKEAYSTQLRFIESCQNQN*	880

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan13g1073	879	Gene3D	Phosphorylase Kinase; domain 1	555	665	-	-
	Lan13g1073	879	ProSiteProfiles	Protein kinase domain profile.	590	866	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan13g1073	879	SUPERFAMILY	L domain-like	359	482	-	-
	Lan13g1073	879	ProSiteProfiles	Leucine-rich repeat profile.	438	460	IPR001611	GO:0005515
	Lan13g1073	879	Gene3D	Transferase(Phosphotransferase) domain 1	666	877	-	-
	Lan13g1073	879	PANTHER	OS07G0107800 PROTEIN-RELATED	10	453	-	-
	Lan13g1073	879	PANTHER	OS07G0107800 PROTEIN-RELATED	456	874	-	-
	Lan13g1073	879	Gene3D	-	192	347	-	-
	Lan13g1073	879	CDD	STKc_IRAK	596	863	-	-
	Lan13g1073	879	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	712	724	IPR008271	GO:0004672\|GO:0006468
	Lan13g1073	879	SUPERFAMILY	Protein kinase-like (PK-like)	571	861	IPR011009	-
	Lan13g1073	879	Pfam	Protein kinase domain	592	858	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan13g1073	879	ProSitePatterns	Protein kinases ATP-binding region signature.	596	618	IPR017441	GO:0005524
	Lan13g1073	879	SMART	serkin_6	590	866	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan13g1073	879	Pfam	Malectin-like domain	30	344	IPR024788	-
	Lan13g1073	879	Gene3D	Ribonuclease Inhibitor	355	517	IPR032675	-
	Lan13g1073	879	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	456	874	-	-
	Lan13g1073	879	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	10	453	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan13g1073	Lan-Chr13	16007030	16013213	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan13g1073	8	874	Receptor kinase-like Gene Family	AT5G48740	59.417	0.0	1063

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Lan13g1073		Malectin_like	1.2e-52	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan13g1073	-		-	aprc:113850446	1405.58