Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1062 ATGGATGAGAAGGTGAAGAAGAAGAAAGGGTCTAAGATTGATGAAAGCAACTCAGGAAGTGGTTTTGAGTTGGAGCTAAATAAAGGAAAGAAAAGGAAGCATAAGGAGGGAAAGAAAAAGCATGGAACTGATGAAATAGTCGATTTAAGTGAAGCCCAGGAGAAAAATTGTACTGGTGAAGTAACTGAGAGACAAACTGACTCCATTGATGGAAACAGGGAAACGGAGAACCATATCAATAAGAAAAAAAAGAAAAAGAAGAGAAAAGAGTGTGATGCTTTATTAGATGGAATGCAAGAAGTGGATGCCTCAAAGCCTAGCAAAAAGGGGAAAATGACTGAGGATAACGAATTCCAAAACAATGAACATGATCTTCCTTTGGTAAAAGACAATGAAGCTGAAGGTGATGATCAAGGCAAGAAGAAGAAGAAGTCGAGTGGAAAAAGTAAACTCACGGACAAGTCTAAAATCAATGAATGTGATCAAGATCTGGCCAAAAGCAGTTTAACTGAAGACGATGACCAAGGCAAGGAGATGAAGAAGGAACTCAGTGGTAAAGGGAAACGTAAGGAGAGTAATGATTTTAATGAACATGAACAGGGCAAGAAGAGGAAGGCGAAGAAGAAAACCAAGGCTAGTACAACTGAATCTCCAAGCCCTGCACCTGGTTCAACATCTAAACCCAAACGAGTAACCTTTTCTGATAAAGTCGAGGTTTGTTCTGATGACATTGTAGTGCGTGGGATAAGATTTACACCGGAAGAAGATGAAAAGATTAAAGAGGCTGTTTTTAGTTACATAAAGAGTCATGATTTGGGCGATGAAGGTTTAGATATGGTACTCCATTGCAGATTGCATCCAGAAGTTAAAGATTGTTGGAAGGAAATTGCAGCAACCTTACCTCATAGGCCTCATGGAAGTGTGTATAATCGTGCTCATGTTTTGTTTGAAAGGGATGAGAAGCGTAACTGGACAGAAGAAGAGGTTGAGTTTATTAAGAATGTCCAGAAACAACATGGATCCGATTGGAAATCAATAGCTGAAGCATTAGGTAAAAGCCGTTTTCACGTCAAGGATACGTGGCGTAGAATAAAATTAGACACTGCAAAAACAGGACATTGGACCCAAGAGGAGTACCAAAATTTATTTGATTTAGTAAACTTGGATCTACGTGTGAGGGCTTTAGAGGAAAGTAAGCAATCAAGACATGGTATGTTGCGAGATAATATTAGCTGGGAGGCAATTGCTGGCAAACTGGAAACTAGAACTAGCCAACGCTGCTGCAAAAAATGGTATGAGCAAATAACATCACCGATGGTCGCTGATAATATGTGGAGTGATACTGATGACTACCGCCTGATTAATGCTTTATTTACCTTGGATGCTTGCTGCTTTGAGGAGGTTGAGTGGGACTATCTGCTTGATCATAGACCTGGTGATGTATGTAGAAAACGATGGAACGAAATGGTCCGACATATTGGAGAGCTTGTGGGGAAGTCATTTGTTGACCAAGTGGAAATTCTTGCAAAGAGATTCTGCCCTGAGTTATTGGAAGCAAGAGAAGCCTTTGACAGCAAACCTGTGATTAATTGA 1593 0.4011 MDEKVKKKKGSKIDESNSGSGFELELNKGKKRKHKEGKKKHGTDEIVDLSEAQEKNCTGEVTERQTDSIDGNRETENHINKKKKKKKRKECDALLDGMQEVDASKPSKKGKMTEDNEFQNNEHDLPLVKDNEAEGDDQGKKKKKSSGKSKLTDKSKINECDQDLAKSSLTEDDDQGKEMKKELSGKGKRKESNDFNEHEQGKKRKAKKKTKASTTESPSPAPGSTSKPKRVTFSDKVEVCSDDIVVRGIRFTPEEDEKIKEAVFSYIKSHDLGDEGLDMVLHCRLHPEVKDCWKEIAATLPHRPHGSVYNRAHVLFERDEKRNWTEEEVEFIKNVQKQHGSDWKSIAEALGKSRFHVKDTWRRIKLDTAKTGHWTQEEYQNLFDLVNLDLRVRALEESKQSRHGMLRDNISWEAIAGKLETRTSQRCCKKWYEQITSPMVADNMWSDTDDYRLINALFTLDACCFEEVEWDYLLDHRPGDVCRKRWNEMVRHIGELVGKSFVDQVEILAKRFCPELLEAREAFDSKPVIN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1062 530 MobiDBLite consensus disorder prediction 1 232 - -
Lan13g1062 530 Gene3D - 325 364 - -
Lan13g1062 530 Gene3D - 365 439 - -
Lan13g1062 530 Coils Coil 72 92 - -
Lan13g1062 530 MobiDBLite consensus disorder prediction 89 143 - -
Lan13g1062 530 ProSiteProfiles Myb-like domain profile. 366 435 IPR001005 -
Lan13g1062 530 ProSiteProfiles Myb-like domain profile. 437 490 IPR001005 -
Lan13g1062 530 MobiDBLite consensus disorder prediction 39 78 - -
Lan13g1062 530 CDD SANT 323 365 IPR001005 -
Lan13g1062 530 SUPERFAMILY Homeodomain-like 321 382 IPR009057 -
Lan13g1062 530 SUPERFAMILY Homeodomain-like 415 493 IPR009057 -
Lan13g1062 530 MobiDBLite consensus disorder prediction 213 230 - -
Lan13g1062 530 Pfam Myb-like DNA-binding domain 324 382 - -
Lan13g1062 530 SMART sant 247 318 IPR001005 -
Lan13g1062 530 SMART sant 320 367 IPR001005 -
Lan13g1062 530 SMART sant 441 492 IPR001005 -
Lan13g1062 530 SMART sant 370 437 IPR001005 -
Lan13g1062 530 MobiDBLite consensus disorder prediction 150 201 - -
Lan13g1062 530 CDD SANT 374 433 IPR001005 -
Lan13g1062 530 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 321 369 IPR017930 -
Lan13g1062 530 ProSiteProfiles Myb-like domain profile. 316 365 IPR001005 -
Lan13g1062 530 PANTHER GB|AAC33480.1 18 529 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1062 318 506 MYB Transcription Factor Family AT4G32730 24.490 1.58e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan13g1062 Myb_DNA-bind_6 3.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1062 - - aprc:113872850 572.007