Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1059 ATGATATTCAAATCACACCATTACCAAAACCTTCTCTATCTCATATCTCAAACAACAACACCATTTTCAACAACCCATTTACTTCAACCATTCCCATTTTCTCTTAAACTCTTCACAACCACTACTACTACTACTACTACTTCAGAATCATTACATTCTTTCACTGTCTCCTACCTCATCAACAATCTTGGGTTCCCATCAGAAACTGCTACAAAAGTTTCAAAACGACTGCGTTTTGATACCTCACAGAAGCCTGATAAAGTTGTAGCCTTTTTCAAAAACCATGGATTTTCAGTTTCTCAGGTGAATGGTGTTCTTAGAAGGTCACCACAGTTGCTTTTATGCGATGCCCACAAATTTATTTTGCCAAAGTTTGAATTTTTAGCCTCCAAAGGTGCTTCTACCTCTGAAATTGTTCTTGCTGTGAGTAATAACCCTAGATTCCTAAATTCAAGCCTTGAGAATAGCATAATCCCTATGTATGAATTGCTTAGTAGTTTGTTTCAATCTGATGAGGAAGCCCTTGATTGTTTCTTTCGTTGGCCTAATTTATTAGGAAACAAGAAGCGTTTACAGGAAAATTTGAAATTATTGCGTGATGAAGGAGTGAGGGATTCAAATATTGCCCGTTTGATTCGGACGAGGGCTTCGGTTTTCGATTCCTATGGTTTGAAGAAGGCAGTGGATGAAGTAAAGGAGTTAGGGTTTGATCCTTCAAAAGGAACATTTGTTACAGCATTGATGGCGAAATTGGGTCTGTCGAAACTCACTTGGAATGCGAAAGTCGATGTCTATAAGAGCTGGGGTTGGTCTGAAGAAGATATTGTTGCTGCATTCAGGAGAAATCCAACTTCTATGTTGGTGTCTAAGGATAAAATTAATGCAACATTGAGCTTCTGGGTCAATCAACTAGGTTGGGATTCGTCGGTCCTCGCCATATCTCCGGTGCTTCTCGGACTAAGTTTGGAGAAAAGGGTCATTCCAAGGGCTTATGTGGTTGATTATCTACTCACAAAAGGTCTGAGAAAGAAGAATGCAAGCTTGATTACACCATTCCTTATGTCTGAAAAGTTGTTCCTTGAAAAGTATGTAGAAAATTTCAAGGAAGAAACTTCACAGCTATTAAAGCTATACCTGGGAGAAAAAAAGCTGAATTTTCAAGATAAGGATTAG 1173 0.3853 MIFKSHHYQNLLYLISQTTTPFSTTHLLQPFPFSLKLFTTTTTTTTTSESLHSFTVSYLINNLGFPSETATKVSKRLRFDTSQKPDKVVAFFKNHGFSVSQVNGVLRRSPQLLLCDAHKFILPKFEFLASKGASTSEIVLAVSNNPRFLNSSLENSIIPMYELLSSLFQSDEEALDCFFRWPNLLGNKKRLQENLKLLRDEGVRDSNIARLIRTRASVFDSYGLKKAVDEVKELGFDPSKGTFVTALMAKLGLSKLTWNAKVDVYKSWGWSEEDIVAAFRRNPTSMLVSKDKINATLSFWVNQLGWDSSVLAISPVLLGLSLEKRVIPRAYVVDYLLTKGLRKKNASLITPFLMSEKLFLEKYVENFKEETSQLLKLYLGEKKLNFQDKD* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1059 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 380 - -
Lan13g1059 390 Pfam mTERF 90 299 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 Pfam mTERF 251 359 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 Gene3D Transcription termination factor 3, mitochondrial 170 377 IPR038538 -
Lan13g1059 390 PANTHER CGI-12 PROTEIN-RELATED 26 380 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 SMART mt_12 175 204 IPR003690 GO:0003690|GO:0006355
Lan13g1059 390 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1059 Lan-Chr13 15813251 15814687 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan13g1059 mTERF 8.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1059 K15032 - gmx:102666739 363.614