Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1056 ATGGGTATTTCTAGGGATTCTATGCATAAGAGACGTGCCACTGGTGGCAAAAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGTCGTCAGCCTGCAAACACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATCCGTGTTAGGGGTGGAAATGTCAAATGGAGGGCATTAAGATTGGACACTGGAAACTTCTCATGGGGAAGTGAAGCCGTGACCCGCAAGACTCGTCTTCTTGATGTTGTTTACAATGCCTCCAACAACGAGCTTGTGCGAACTCAGACCCTGGTCAAGGGCGCAATCGTTCAGGTTGATGCTGCTCCATTCAAGCAATGGTACCTTCAGCACTATGGTGTTGAAGTTGGCAGGAAAAAGAAAACAGCATCCAAGAAGGACACTGCAGAGGAAGGTGAAGCTGTAGCCGCTTCTGAAGAAGCTAAGAAAAGCAACCATGTCCAGAGGAAAATTGAGAAGCGCCAGAAGGATCGTCAACTTGACTCCCACATTGAAGAGCAGTTTGGTGGCGGTCGATTGCTTGCCTCTATTTCTTCTCGCCCAGGTCAATGCGGCAGGGCTGATGGGTATATTTTGGAAGGTAAGGAGTTGGAGTTTTACCTGAAGAAACTGCAGAAGAAGAAGGGCAAGGGTGCTGCCTAA 660 0.4788 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEVGRKKKTASKKDTAEEGEAVAASEEAKKSNHVQRKIEKRQKDRQLDSHIEEQFGGGRLLASISSRPGQCGRADGYILEGKELEFYLKKLQKKKGKGAA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1056 219 TIGRFAM eS8: ribosomal protein eS8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lan13g1056 219 MobiDBLite consensus disorder prediction 1 41 - -
Lan13g1056 219 Pfam Ribosomal protein S8e 5 198 IPR022309 -
Lan13g1056 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 - -
Lan13g1056 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Lan13g1056 219 MobiDBLite consensus disorder prediction 11 26 - -
Lan13g1056 219 MobiDBLite consensus disorder prediction 125 168 - -
Lan13g1056 219 Gene3D - 163 216 - -
Lan13g1056 219 Gene3D - 32 162 - -
Lan13g1056 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lan13g1056 219 CDD Ribosomal_S8e_like 5 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1056 Lan-Chr13 15742518 15744786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1056 1 207 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.575 1.91e-125 351