Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1050 ATGAGTCGAGGTGATACTCAAGAATTTGTTGATCTGAACAAACTAGCCGAGCGCTTCCTTAGAGGAACCTATAATGCTTCAGACGGTGAAGTAAAAGATGCACCTTCATGTGCTTATGTTCAAGAAGTTGTTGAAGAGCTCCGTAAGGGGGAACAGGGAGAGTGTCCAATATGTCTTGAAGCATTTGAAGATGCAGTGTTGACACCTTGTGCTCACCGCTTATGTCGGGATGCTTATTGGCAAGTTGGCGAAATGCTACTTCTGGTTTATGTCCTGTTTGTAGGGAAACAATCAGCAGACAGGATCTTATCACTGCTCCTACTGATAGTCGATTTAAGGTTGATATTGAAAAGAACTAGGTAG 363 0.4298 MSRGDTQEFVDLNKLAERFLRGTYNASDGEVKDAPSCAYVQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRDAYWQVGEMLLLVYVLFVGKQSADRILSLLLLIVDLRLILKRTR* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1050 120 Pfam RING-type zinc-finger 55 80 IPR027370 -
Lan13g1050 120 SUPERFAMILY RING/U-box 43 76 - -
Lan13g1050 120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 82 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1050 Lan-Chr13 15531782 15533872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1050 1 81 RAD5 or RAD16-like Gene Family AT5G22750 71.429 8.20e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1050 K15505 - lang:109325047 232.646