Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1042 ATGGCGAGATATAGTTTTATTGTCTTTTGTGTCAATTTCATTATGACATGCACACTACTTTTAAAGTGTGATGCAGGTTATGATAATCCAAAACTTTATATTGTGTATATGGGCTCAATTCCTAAGACACCATATTCTTTAACCTCTAACCATTTAAGCATGTTGCAACAAGTCTTTAATGACAATGATGTAACAAATTCCTTAGTCCATAGTTACAATAGAAGTTTCAATGGGTTTGCTGCCATGCTCACTAATCAGCAAAAGGAAAAGCTTTCTCAAATGGAAGGTGTAGTCTCAGTTTTCCCAAGCAGAAATATCCAATTACACACAACTCGATCATGGGACTTCATTGGATTCCCCGAGTCAGTCAAACGAAGTCCTACTATAGAGAGTGATGTTGTGGTTGGAGTTATTGACACTGGTATATGGCCTGAATCTGATAGTTTCAATGATCAAGGTTTTGGCCCTGTTCCAAAACATTGGAAGGGTGTTTGTGCGGGTGGTATGAACTTTACTTGCAATAAAAAGATCATCGGTGCTAGATATTATACAGATAAGTCTGCCAGAGACATGAATGGACATGGAACACATACTACATCAACAGCTGCTGGAAACTATGTTGCTGGTGCAAGCCTTTATGGACTTGCACAAGGTAATGCAAGAGGTGGAGTCCCATTAGCAAGAATAGCTACATATAAAGCATGCACTGATATAGGATGCAGTGCTGCTGCTATCTTGTCTGCTTTCGATGATGCCATAGCTGATGGCGTAAACATCATTTCAATTTCAATAGGAAGTCCTTCCCAACAACCTTTCGATGAAGATGCTATCGCGATTGGTTCATTTCATGCTATGGCAAGAGGGATACTCACAGTGAATGGTGCAGGTAATAGCGGTCCATTTCCAAGCTCTGTTTCTAGTATAGCGCCATGGATACTTACTGTAGCTGCAAGTACAACAGATAGAAGATTCATTGACAAAGTAATTTTGGGGAATGGAAAAACACTAATAGGTACATCAATAAATTCTTTCACATTAAATGGAACACAAGTTCTAATTGCTAAGAAAAATTATGGTTCGGAATGTCCAGAAGGAAATTCTGTTGTATGCAGTTGTTTAGATAGTCATGTGGTGGATGGAAAAATAATTATATGTAATACAATTGATGGAATTAGTGTGATAAATTATGATGAAGGACACCCAATTGGTATAATCATACAAAATCATCATAAAGGTTCACTAGATGACTATGTCACTCCATTACCTTCTTTGACTTTGTCTGAAATTGAGTTACAACTTTTGAGTTCCTACATGAATTCAACAGACAATCCCACAGCTGAAATACTAAAGAGTGAGATAGTTAAAGACAATAATGCTCCTATGGTAGCTGATTTTTCTTCACGTGGGCCAAATAAAATTGCTCCGGAAATTTTGAAACCAGATATAAGCGCCCCCGGAGTGGATATATTGGCTTCATTTTCGCAAGCTGTTTCTCCATCAGGTAAAAACATCGATAAAAGATCTGCAAAATATACCATAAGATCAGGAACATCCATGTCATGCCCCCATGTCTCTGGAATTGCTGCATATCTGAAAACATTTCATTTGGATTGGTCACCAGCAGCCATCAAATCTGCTCTTATGACATCAGCAAAACCTATGAAGGGTTCGAAGGATGATATTGGTGAATATGCATATGGATCCGGTCATGTCAATCCTATTCCAGCTATTGATCCTGGACTTGTCTATGACATTTCCTTGGAAGACTATATACAAATGCTTTGCAACTTGGGTTATGATAACGAAAAGGTTAAATTAATCTCTGCAAAAAATAATGCTTGCTCCGATGCTCCAAATAGATCATTAGTGAAAAATCTAAATTATCCCGCGCTTGCTATTGATGTTAAGCCAATGACATCTTTTACCATAAAGTTTAGTAGAACAGTCACAAATGTTGGCCTAGCAAACTCAACCTATAAGGCAACAATTTTACCAAATCCAAGAATCAAAGTTATGGTGGTACCCGAGATATTATCCTTCAAATCTCTACATGAGAAACAATCTTTTATCGTCACTATTACCGGTGATAAATTACCAACAACAAATGTACTTACTTCGTCATTAGTGTGGTCAGATGGCACCCATAATGTCAGGAGTCCAATTGTTATAAATGTTTCAAATTAG 2184 0.375 MARYSFIVFCVNFIMTCTLLLKCDAGYDNPKLYIVYMGSIPKTPYSLTSNHLSMLQQVFNDNDVTNSLVHSYNRSFNGFAAMLTNQQKEKLSQMEGVVSVFPSRNIQLHTTRSWDFIGFPESVKRSPTIESDVVVGVIDTGIWPESDSFNDQGFGPVPKHWKGVCAGGMNFTCNKKIIGARYYTDKSARDMNGHGTHTTSTAAGNYVAGASLYGLAQGNARGGVPLARIATYKACTDIGCSAAAILSAFDDAIADGVNIISISIGSPSQQPFDEDAIAIGSFHAMARGILTVNGAGNSGPFPSSVSSIAPWILTVAASTTDRRFIDKVILGNGKTLIGTSINSFTLNGTQVLIAKKNYGSECPEGNSVVCSCLDSHVVDGKIIICNTIDGISVINYDEGHPIGIIIQNHHKGSLDDYVTPLPSLTLSEIELQLLSSYMNSTDNPTAEILKSEIVKDNNAPMVADFSSRGPNKIAPEILKPDISAPGVDILASFSQAVSPSGKNIDKRSAKYTIRSGTSMSCPHVSGIAAYLKTFHLDWSPAAIKSALMTSAKPMKGSKDDIGEYAYGSGHVNPIPAIDPGLVYDISLEDYIQMLCNLGYDNEKVKLISAKNNACSDAPNRSLVKNLNYPALAIDVKPMTSFTIKFSRTVTNVGLANSTYKATILPNPRIKVMVVPEILSFKSLHEKQSFIVTITGDKLPTTNVLTSSLVWSDGTHNVRSPIVINVSN* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1042 727 CDD PA_subtilisin_like 328 448 - -
Lan13g1042 727 Gene3D Peptidase S8/S53 domain 132 590 IPR036852 GO:0004252|GO:0006508
Lan13g1042 727 Gene3D - 594 726 - -
Lan13g1042 727 Gene3D - 321 455 - -
Lan13g1042 727 CDD Peptidases_S8_3 107 551 IPR034197 -
Lan13g1042 727 Pfam Subtilase family 131 569 IPR000209 GO:0006508|GO:0008236
Lan13g1042 727 ProSitePatterns Serine proteases, subtilase family, serine active site. 516 526 IPR023828 -
Lan13g1042 727 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Lan13g1042 727 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Lan13g1042 727 PRINTS Subtilisin serine protease family (S8) signature 515 531 IPR015500 -
Lan13g1042 727 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
Lan13g1042 727 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 725 IPR045051 -
Lan13g1042 727 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 32 725 - -
Lan13g1042 727 SUPERFAMILY Subtilisin-like 108 581 IPR036852 GO:0004252|GO:0006508
Lan13g1042 727 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Lan13g1042 727 Pfam Fibronectin type-III domain 625 723 IPR041469 -
Lan13g1042 727 ProSiteProfiles Serine proteases, subtilase domain profile. 113 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1042 Lan-Chr13 15205829 15208049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1042 27 723 Subtilisin-like Serine Gene Family AT5G59100 51.332 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1042 - - lang:109341651 934.48