Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1039 ATGAAGTTCACTCATATCTGTATTGTTTTACCATCATATTCTTGTGAAATGGATCAACCTGAAATGGTTACTCAACAAGCTTTTCAAACTCCAATGGTTCAAGAAGTTAAGGTCAAACAACCCCACAGGGTTTGTGTGGGACAAGTTGTTTCTTTGGTTAAATATTCATTAAGGAAGTTACATAACTCAGGGTGGTGGAGAACTTGCAAACATGGATTGAAGAAAGAAAAGAAGAATAGCTCTTGTGTGTTTCATGACATGGATGGTGTGCAAGTTTCTTTGAAGATTGGTAGGGACAATCCAAGGATTTTCAGCTATGCTGAGCTCTTTATAGGGTCAAATGGTTTCAGTGAGGATGAAGTTGTTGGGAGTGGAGGGTTTGGAAAAGTGTATAAAGCTGTTTTGCCAAGTGATGGAACTGTGGTTGCTGTGAAATGCTGCTTAGCTGAGAAAGGGAAGCAAATTGAGAAGAGTTTTGCTGCAGAGTTAACAGCCGTAGCGGATCTTCGCCATCGGAACTTAGTTAGGCTTAGAGGATGGTGTGTTCATGAAGATCAGTTGTACCTTGTTTATGACTACATGCCTAATCGCAGCCTCGACCGTATACTCTTTGGTAAGCACAAGAATTTTAAGGCTGGGCCTCTTGATTGGGGACAAAGAGTGAAAATTGTTAATGGTTTAGCAGCTGCATTGTATTATCTACATGAACAGTTAGAAACTCAAATTATCCATAGGGATGTGAAAACAAGCAATGTGATGCTTGATTCTCATTATAATGCTCGGCTAGGTGACTTTGGCATGGCAAGGTGGCTGGAACATGAGATTGAGTACAAGACAAGGAAAACATCAGCAAGAATCGATTGGTTTCGATTGGGAGAGACATCGAGAATTGGCGGTACAATTGGCTATCTTCCCCCTGAAAGCTTAGCGAAACCAAGCAATGCTACCTCCAAATCTGATGTCTTCAGCTTTGGGATAGTTGTGCTAGAGGTGGTATCCGGAAGGAGAGCAATAGATCTTACATACCCTGATGAACAAATCATTTTGCTTGATTGGATCAGAAGGCTTTCTGATGAAGGGAAGCTTATGGATGCAGGCGATGCTCGGATACCAGATGGATCTTACAAGCTAAATGAGATGCAACATCTCATTCATTTAGGCCTCCTCTGCACATTCCATGACCCACAATTGAGGCCAAGCATGAAATGGATTTTGGAAGCACTTTCTGACTTTTCTTGCAAATTGCCAAAACTCCCATCGTTTCAATCCCATCCTTTATATATCTCCTTGTCTCCTTCCCCAACTGAGACTAGTCCTAGCAGCAAGAGTGGCACTAGCACTTGCACAGAGAATACTAGCATGATCACCAATTACACTTCATCCAATTATGTTACAGCCGCAGGTGAAACTGTATATGTAACTGTTGAACACAAAAACAGCGAAATCATCTCGTCTAAGAGCATGCAGCGTCACCGACGGCCGCTTCATGTATTTGAAACTCCAAGGGAAATATCATACAAGGAGATTGTTTCAGCTACAGATAACTTCTCAGACTCAAAAAGGGTGGCAGAACTAGATTTTGGATCTGCTTATCATGGCATCCTTGATGGAAATTTATATGTTTTGGTGAAACGCCTAGGGATGAAAACATGTCCTGCGTTGCGCGATAGATTTTCTAATGAACTCAGGAATCTAGGAAGGCTTCACCACAGGAATTTAGTGCAACTTCGTGGATGGTGCACCGAGCAAGGAGAGACGCTTGTTGTTTATGATTACTCAGCTAGTAGAAATTTGAGTCAAATGCTTCTCCATCATAAAAATGGTAGAACTAGGAATCCTGTTCTTCAATGGCATCACAGATACAGCATATTGAAATCACTTGCTTCTGCAATTCTATATCTGCATGAGGAATGGGAGGAACAAGTCATTCACAGAAACATTACCTCATCAGCTGTCATTCTTGAACCAGATATGAATCCAAGACTCGGCAGTTTTGCTCTAGCTGAATTTTTGTCAAGAAATGAGCATGGTCATCATGCAGTCACTGACACTCGTAAATCGGTTCGCGGGATTTTTGGCTACATGTCACCAGAATATGTGGAATCCGGTGAAGCAACCACATCGGCTGATGTTTATAGTTTTGGTGTGGTGGTGCTTGAAGTGGTCAGTGGACAGATGGCAGTTGATTTCAGGCAGCCAAAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGAGATGAAAAAAAGGCCATTGAAGGAGTTAGCAGACATAAGACTCAATGGAGAGTACAATAACAAAGAATTCATGAGATTGGTAAGATTAGGAATTGCTTGCACCCATTGTAACCCACAATTAAGACCAAGTATGAGACAAATAGTAAGCATACTTGATGGAAATGATAATATACTTATTCAAAGATTCAAGGAAAGCAGAGAAGAATGGAGACAAAGAAATGCTAGTGCTTTGTCATTGGTTAAGAGAATCCAAGGTCTAGGAATACAGTAA 2505 0.412 MKFTHICIVLPSYSCEMDQPEMVTQQAFQTPMVQEVKVKQPHRVCVGQVVSLVKYSLRKLHNSGWWRTCKHGLKKEKKNSSCVFHDMDGVQVSLKIGRDNPRIFSYAELFIGSNGFSEDEVVGSGGFGKVYKAVLPSDGTVVAVKCCLAEKGKQIEKSFAAELTAVADLRHRNLVRLRGWCVHEDQLYLVYDYMPNRSLDRILFGKHKNFKAGPLDWGQRVKIVNGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGMARWLEHEIEYKTRKTSARIDWFRLGETSRIGGTIGYLPPESLAKPSNATSKSDVFSFGIVVLEVVSGRRAIDLTYPDEQIILLDWIRRLSDEGKLMDAGDARIPDGSYKLNEMQHLIHLGLLCTFHDPQLRPSMKWILEALSDFSCKLPKLPSFQSHPLYISLSPSPTETSPSSKSGTSTCTENTSMITNYTSSNYVTAAGETVYVTVEHKNSEIISSKSMQRHRRPLHVFETPREISYKEIVSATDNFSDSKRVAELDFGSAYHGILDGNLYVLVKRLGMKTCPALRDRFSNELRNLGRLHHRNLVQLRGWCTEQGETLVVYDYSASRNLSQMLLHHKNGRTRNPVLQWHHRYSILKSLASAILYLHEEWEEQVIHRNITSSAVILEPDMNPRLGSFALAEFLSRNEHGHHAVTDTRKSVRGIFGYMSPEYVESGEATTSADVYSFGVVVLEVVSGQMAVDFRQPKVLLVKKVHEFEMKKRPLKELADIRLNGEYNNKEFMRLVRLGIACTHCNPQLRPSMRQIVSILDGNDNILIQRFKESREEWRQRNASALSLVKRIQGLGIQ* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1039 834 SUPERFAMILY Protein kinase-like (PK-like) 492 796 IPR011009 -
Lan13g1039 834 Pfam Protein tyrosine and serine/threonine kinase 522 796 IPR001245 GO:0004672|GO:0006468
Lan13g1039 834 Gene3D Transferase(Phosphotransferase) domain 1 194 417 - -
Lan13g1039 834 Gene3D Transferase(Phosphotransferase) domain 1 595 820 - -
Lan13g1039 834 Pfam Protein kinase domain 117 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1039 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Lan13g1039 834 PANTHER - 3 832 - -
Lan13g1039 834 CDD STKc_IRAK 527 798 - -
Lan13g1039 834 ProSiteProfiles Protein kinase domain profile. 116 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1039 834 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Lan13g1039 834 Gene3D Phosphorylase Kinase; domain 1 476 592 - -
Lan13g1039 834 SMART serkin_6 116 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1039 834 ProSiteProfiles Protein kinase domain profile. 516 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1039 834 SUPERFAMILY Protein kinase-like (PK-like) 100 436 IPR011009 -
Lan13g1039 834 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 3 832 - -
Lan13g1039 834 Gene3D Phosphorylase Kinase; domain 1 89 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1039 Lan-Chr13 15183104 15185947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1039 506 799 Receptor kinase-like Gene Family AT3G53810 38.462 7.49e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan13g1039 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1039 - - lang:109352493 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1220 7 16901695 16904383 Lan13g1039 13 15183104 15185947 LSH