Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1037 ATGCAGGAGTTTTCCAATGTTAATGTTGCTCCTTTCCATCGCAATGAACCAAATGCGAAAGCTCGAATTAGAGTGAGGGCGACTTTGCGCCTTTTCCATGCTGTTTGTAGAAGGTTAATGAAGGAAGAAAATAAGATTTCGAGAGGAGGCGGGAGGGCTGATGTTCGAGCAGCCAAGTTTCTTTATGATAATGGAAAATATATTAATGAAGGGAAGCAGATCATAGGATCTGTCCCTGGTGTTGAAGTTGGTGATGAATTTCAGTACTGGAAGGAGCTTAACATACTCGGCCTTCATAATCAGCTTGTAGCTGGCATTGGTTATTCGAAACGCAATGGTAGGGTCCTTGCTACGAGTGTTGTTTCATCATCAGGGCATTATGATGATGAAATGGATAGTACAGATGTTTTGGTTTATACAGGGCAAGGGGGGAATGTGATAAAAAATAAAAACACTGATAAACCCGAAGACCAGAAACTCGAGAGGGGGAATCTTGCTTTGAAGAATAGCATCGAGGCAAAGAATCCGGTTAGGGTGATTATGAAGTCTGAATCCAAGGATGGAAGCTGTAAAGTATATGCATATTATGGTCTGTATGAAGTTGTGAGATATTGGCAGGAGATATGGTCACACGGTATGTTGGTTTTCAAGTTTGAGATGAGAAGGATACCGGGTCAATTAGATGTTCCATGGAAAGAGTTGAAGAAATCCGAAAAATCCAAAATGAGGAAGGGTTTATGTGTTGCTGACATTTCTTATGGGAAAGAGCTAATTCCTGTGTGCGCTATTAATACAGTTGATGACGAGAAACCCCCGAAATTTAAATACTTATCTAGCATGATATATCCTAATTGGTATAGTCCTGGTAGTCCGGTTGGTTGTGATTGTACTAGTGGATGCACTGACTCAGAGAAGTGTGCTTGTGCAGTGAAAAATGGGGGTAAAATCCCATTCAATCATAATAAGGCTATTGTGGAAGCAAAGCCGAAAAGTGTTGTCTATGAGTGTGGTCCTCATTGCAGGTGCCCTCCAACATGCCATAATAGAGTTAGTCAACATGGCATAAAATTTCAATTTGAAATTTTTAAAACAAAGACAAAGGGTTGGGGAGTGAGATCCCTTAATACCATTCCTTCCGGAAGTTTTATCTGTGAATACACCGGAATGCTTCTCGAAGATGCAGAGGCTGAAAAAAATATCGGTCAAGATGAGTATCTGTTTGATATTGGGAATAACTACATCGATAGCAGTCTTTGTGAAGAACTTTCGAAAATCATGCCCGATGCAGCAGACTCGAGTTCTTCTGAAGTTTTCGAGGATGGTGGCTTCACAATTAACGCTGCCAACTATGGTAATATAGGGAGATTCATCAACCATAGTTGCTCTCCTAACCTTTTTACTCAAAATGTCCTTTATGATCATGATGATAAGAAGATTCCTCACATAATGCTATTTGCTGATATGAACATTCCTCGCATGCAAGAGCTGGCTTACCATTACAATTACAAAATAGATCAAGTTTTCGATTCCGATGGCAATATAAAGAAGAAGAATTGCTTTTGTGGTGCTCTGGAGTGCACTGGCAGGATGTACTAA 1596 0.4029 MQEFSNVNVAPFHRNEPNAKARIRVRATLRLFHAVCRRLMKEENKISRGGGRADVRAAKFLYDNGKYINEGKQIIGSVPGVEVGDEFQYWKELNILGLHNQLVAGIGYSKRNGRVLATSVVSSSGHYDDEMDSTDVLVYTGQGGNVIKNKNTDKPEDQKLERGNLALKNSIEAKNPVRVIMKSESKDGSCKVYAYYGLYEVVRYWQEIWSHGMLVFKFEMRRIPGQLDVPWKELKKSEKSKMRKGLCVADISYGKELIPVCAINTVDDEKPPKFKYLSSMIYPNWYSPGSPVGCDCTSGCTDSEKCACAVKNGGKIPFNHNKAIVEAKPKSVVYECGPHCRCPPTCHNRVSQHGIKFQFEIFKTKTKGWGVRSLNTIPSGSFICEYTGMLLEDAEAEKNIGQDEYLFDIGNNYIDSSLCEELSKIMPDAADSSSSEVFEDGGFTINAANYGNIGRFINHSCSPNLFTQNVLYDHDDKKIPHIMLFADMNIPRMQELAYHYNYKIDQVFDSDGNIKKKNCFCGALECTGRMY* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1037 531 Gene3D SET domain 244 531 IPR046341 -
Lan13g1037 531 SUPERFAMILY PUA domain-like 60 235 IPR015947 -
Lan13g1037 531 SMART G9a_1 71 226 IPR003105 -
Lan13g1037 531 ProSiteProfiles Post-SET domain profile. 515 531 IPR003616 -
Lan13g1037 531 SMART set_7 357 507 IPR001214 GO:0005515
Lan13g1037 531 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 6 530 - -
Lan13g1037 531 Gene3D - 62 243 IPR036987 -
Lan13g1037 531 Pfam SAD/SRA domain 75 226 IPR003105 -
Lan13g1037 531 ProSiteProfiles SET domain profile. 357 501 IPR001214 GO:0005515
Lan13g1037 531 ProSiteProfiles Pre-SET domain profile. 292 354 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan13g1037 531 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 6 530 - -
Lan13g1037 531 Pfam Pre-SET motif 251 349 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan13g1037 531 Pfam SET domain 368 501 IPR001214 GO:0005515
Lan13g1037 531 ProSiteProfiles YDG domain profile. 76 222 IPR003105 -
Lan13g1037 531 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 25 531 IPR025794 GO:0016571
Lan13g1037 531 SUPERFAMILY SET domain 239 508 IPR046341 -
Lan13g1037 531 SMART preset_2 248 341 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1037 Lan-Chr13 15126255 15128468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1037 72 531 EF-hand Containing Proteins AT5G13960 40.246 3.71e-107 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan13g1037 SAD_SRA 9.2e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1037 K11420 - lang:109363359 1108.59