Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1036 ATGCCATATTCATCTTGCTATTCAACAATCTTCTTCCCTTCAAGCAAATTTCGGCTTCTCTCAATGATTTCATTCGCATTACTCGATGATTTCTTTAACGATTGTAATTGTGATAGTAACGATATCGATATCGAAGACGATACCTCCAATGATTACTTAGCAAAACCACTTTGTGTTCCACAAGACACACTACATGATATGGAATTATGGGATCCAAGTTTTTCTAATGACTTGGATCCAAATATATTGAGTCTATTATACGCCGATGACATAAATGAAGAGTCGAAAACAACGGCGAAAAACGATCATGTATCTCAATCAAACGTTCAAAATAAGTTGAGAGTTATTCGGAGACCTAGAACAAGGAAACCTAGAAGAAAGAGGATTGATTATGGAACATGGTATAAATTTGGTTTTGAGAATTCAGAGACAGTTGAAGAGAAAAGGTGCAGCCAGTGTGAGACAAAACATACTCCTGTGTGGAGAACAGGACCAATGGGGAAAAATACTTTGTGCAATGCATGTGGAATAAGATATAGATCTACCAAATTGTTTCAAGAGTATAGACATCTTCTAAATCCAACTTTTGGTGGCAAAAGGCACTCACATTATAACCTCAGGACATTGAAAACATGA 636 0.3632 MPYSSCYSTIFFPSSKFRLLSMISFALLDDFFNDCNCDSNDIDIEDDTSNDYLAKPLCVPQDTLHDMELWDPSFSNDLDPNILSLLYADDINEESKTTAKNDHVSQSNVQNKLRVIRRPRTRKPRRKRIDYGTWYKFGFENSETVEEKRCSQCETKHTPVWRTGPMGKNTLCNACGIRYRSTKLFQEYRHLLNPTFGGKRHSHYNLRTLKT* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1036 211 PANTHER GATA TRANSCRIPTION FACTOR 1 72 203 - -
Lan13g1036 211 CDD ZnF_GATA 149 181 IPR000679 GO:0006355|GO:0043565
Lan13g1036 211 PANTHER GATA TRANSCRIPTION FACTOR 72 203 - -
Lan13g1036 211 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 147 185 - -
Lan13g1036 211 Pfam GATA zinc finger 150 183 IPR000679 GO:0006355|GO:0043565
Lan13g1036 211 ProSiteProfiles GATA-type zinc finger domain profile. 144 180 IPR000679 GO:0006355|GO:0043565
Lan13g1036 211 SMART GATA_3 144 198 IPR000679 GO:0006355|GO:0043565
Lan13g1036 211 Gene3D - 145 208 IPR013088 GO:0006355|GO:0008270
Lan13g1036 211 ProSitePatterns GATA-type zinc finger domain. 150 175 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1036 Lan-Chr13 15124554 15125189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1036 57 210 C2C2-Gata Transcription Factor Family AT3G60530 30.864 4.69e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan13g1036 GATA 3.2e-13 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1036 - - lang:109363632 399.438