Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1026 ATGGCCGGCATAGACTTAGGTTCATCATCACACTTTGTTCATCATCTTCAACACCCAGACCTTGAAGACGATGATAATCAAGATCAAGACAACAACGAAGGCCTTGACCTAGTTTCACCAAATCAAGGTTCTGGAGATGTTATTGGTCGTAGACCAAGAGGAAGGCCTCCCGGTTCTAAGAACAAGCCAAAACCACCCGTGATCATCACAAGAGAGAGTGCAAATACCCTTAGGGCACACATCCTTGAAGTTAGCAATGGATGTGATGTGTTTGACTCAGTGGCTACTTATGCAAGGAAGAGACAAAGAGGTATATGTGTCCTTAGTGGTAGTGGCACAGTCACCAACGTGACGTTGCGGCAGCCAGCTGCCGCAGGCACGGTGGTGACTTTGCACGGAAGATTCGAGATACTCTCTTTAGCAGGGTCTTTCCTCCCACCTCCAGCACCACCAGGGGCAACAAGTTTGACCGTGTTCCTTGGTGGTGGTCAAGGGCAAGTTGTGGGAGGAAACGTTGTTGGTCCTTTGATAGCTTCTGGTCCAGTTATTGTCATTGCTTCATCATTCACTAATGTGGCATATGAAAGGTTGCCCTTGGAAGATGATGAATCTCTTCAAATGCAACAAGGACAATCATCCGGAGGCGGCGGTGGCGGTGGTGGTGGTAGTGGCGGAGTTAATAACTCTTTTCCTGATCCATCTTCAGGGCTTCCATTCTTCAACCTACCCTTAAACATGCCTCAGTTACCTGTTGATGCTTGGGCTGGAAACTCTGGTGGAAGGCAATCTTATAATAACTGA 801 0.4782 MAGIDLGSSSHFVHHLQHPDLEDDDNQDQDNNEGLDLVSPNQGSGDVIGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSNGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGTVVTLHGRFEILSLAGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLIASGPVIVIASSFTNVAYERLPLEDDESLQMQQGQSSGGGGGGGGGSGGVNNSFPDPSSGLPFFNLPLNMPQLPVDAWAGNSGGRQSYNN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1026 266 MobiDBLite consensus disorder prediction 203 234 - -
Lan13g1026 266 ProSiteProfiles PPC domain profile profile. 74 212 IPR005175 -
Lan13g1026 266 MobiDBLite consensus disorder prediction 18 67 - -
Lan13g1026 266 CDD DUF296 78 153 IPR005175 -
Lan13g1026 266 Gene3D - 77 211 - -
Lan13g1026 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 264 - -
Lan13g1026 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 78 191 IPR005175 -
Lan13g1026 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 264 IPR014476 GO:0003680
Lan13g1026 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 74 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1026 Lan-Chr13 14987484 14988836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1026 1 260 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 55.892 9.16e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1026 - - gmx:100814613 409.838