Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1004 ATGACACAAGAAAAAATCATGTTGAATTCTTCTTCACATGTTCCACGTTGGCTTAAAGTGTTACTCAAAGATAAGTTCTATAACACTTGCATAATTCATGAAGAAGAAAAGAAGAATGAAAAGAAGGTGTTTTGTTTGGATTGTTGCATCAGTCTTTGTCTTCATTGTTTGTCACCTCATCGCTCTCACAGACTCTTGCAGATTAGAAGATATGTCTACAATGATGTTATAAGATTGGATGATGCTGCGAAGTTAATTGACTGCACTTCTGTTCAATCCTACTATACCAACAGTGCAAAAGTGGTGTTTTTAAAGCAAAGGCCTCAAACAAGAAACTTGAGAGGTTCCAGCAGTTCCTGCAGCACATGTTACAGAAGTTTGCAACACCCCTTCCATTTCTGCTCTCTCTTTTGCAAGGTCAACCACCTTATCAGAACAACAGGTTCTCTCTCAGGATACCTATTCGAGTGCAACTACATGCCCTTGTTTGATTCTGGGTTCGACGATGGTCTCATGACACTTGACTCGGTTCTTGAACCGTCCGGTTCGGCTCGTACCTCGTCCCGTTCGAGTGGATATGGTGGAGTTGATTGTAGGACCACACTGGCTTGCACTGCAACCACTGAGATAGTGAGGAGAAAGAGGACAAATTCCCGGCCACCGTGCTCACCGGTGACGGAAATTTCGGTGGGGCTGATCAACCGGAGAAAAGGGGTTCCCCAGAGGGCTCCACTATATTGA 741 0.4399 MTQEKIMLNSSSHVPRWLKVLLKDKFYNTCIIHEEEKKNEKKVFCLDCCISLCLHCLSPHRSHRLLQIRRYVYNDVIRLDDAAKLIDCTSVQSYYTNSAKVVFLKQRPQTRNLRGSSSSCSTCYRSLQHPFHFCSLFCKVNHLIRTTGSLSGYLFECNYMPLFDSGFDDGLMTLDSVLEPSGSARTSSRSSGYGGVDCRTTLACTATTEIVRRKRTNSRPPCSPVTEISVGLINRRKGVPQRAPLY* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1004 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 246 - -
Lan13g1004 246 Pfam PLATZ transcription factor 69 140 IPR006734 -
Lan13g1004 246 SUPERFAMILY B-box zinc-binding domain 27 72 - -
Lan13g1004 246 ProSiteProfiles Zinc finger B-box type profile. 25 68 IPR000315 GO:0008270
Lan13g1004 246 PANTHER - 14 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1004 Lan-Chr13 14638247 14640500 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan13g1004 PLATZ 6.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1004 - - pvu:PHAVU_008G142900g 399.823