Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0999 ATGGCTTCTAATCTACCCTCACCCGCAACAAAGTCTTCAACAACGCCATCTCAGGAAAAACGACACCGTTCCATATTCGAAGTTCCACATAACTTCTTCGATTCTTCTCTTCTTCTTCATTCTCCTCACTCTCTTCTCTCCGATCATCATTTCCATGATTCCCATAACGTAACCCTCCAAACCGTTGAACCATCCGAAAACGACGTCGTTTCAGGGCGTAGGTGGACCTGTAATACCTGCAAAGCTCAATTCGATTCGCTTCAAGACCAGCGTTCGCATTTCAAATCTGATATTCATCGATTCAATGTGAAGCTGACAATTGCTGGAAAGAAAATTGTGAAGGAGGAAGATTTTGAGGTGTTGACGTCTGAATTAGTCAAAGACTATGATGTATCAAGTATATCTGGGTCCGATAGTGATGATGATAGTGAAAATGAGTCTCAGAATCAAAATCGAGTGCGTTACAAATCAGGTGAAAGCCTCAAACAAAAGTTATTTGTATGTCTGCAGACAGGGCAGAGAGTTTCTGTGTGGAAGTGTTTGATTATGAATATGAATGAGAGTGTGCTGTATGATAATGAAAAAGAAGAGAGCAAAATAGTTGAGAGGTTGAAATCACTGACTGTTGAGCCCAGGGATAATACCCGTTTGAGAATTGTTCTGCTTGCATCTGGTGGGCACTTCGCTGCTTGTGTATTTGATGGCGATGCGGTTGTGGCTCACAAGACATTTCACAGATATGTTGTCAGGGCCAAGGCAGGAAAAAAACAGTCATCAAAAGATGCTTCTGGCAGGGCTGCACATTCCGCTGGTGCTTCGCTTCGTCGTCATAATGAACTTGCATTGAAGAAGGAAGTTCAAGAACTGTTTGCTGCTTGGCGACATTATTTTGATGCTTCCAATTGCATTTTTATACACGCACCTTCAAGCAGTCGTCTACTACTTTATGATGGAGAAAGATCATACTTTACCAATCAGCAGTCTGCCATTAGAAATATTCCTTTGACTGTTCGGCGGCCTACTTTCAGGGAAGCGAAGCGTGTATATAGTCAGTTGACCCAAGTATCCTATGAAGCAGACGAGAAGGAAACCTTACAAAGCAACCAAGAGGACATAGTATCAATTCCCAATACTATAAGAAATAGCAGCCCACCTTTGAGAAAAGGGAACATGGATGAGTTGGATCACAAAGATAAAGCTGAAACCTTTTCAATTAAACAAAATGATAAACTCCCCATTTCGATTGACGGAGAGAGTGAGAATGAGCTATGTGATAAATCAACTCCTTTACATCAAGCAGCTCATAGTGATGATTCTGAAAAGGTTATGGAACTCCTGGAACAGGGCTTGGATCCTTGCATCAAAGATGAAAGGGGCCGTACTCCATACATGTTGGCACATGAGAAGGAAGTCAGAAATGCTTTTAGAAGGTTTATGGCATCAAACCCCGACAAATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCAAAGCAGGCGGAAAAAGATGCTAAGAGAAAAGCCAGAGCAAAGGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGTTGAAGCTGCCTTGCCGAAGAATGCTTCAAAACCTGTAGAAAAGCAAGTAACTCCTTCAACATCTACTACGGGACAATCTCGACCGAAGAGTGGTTTGAAATTATCAAAAGAGGAGGAACTACAAAGAGTGCTTGCCGAAGAAAGAGAAAAGAGAGCTGCTGCGGCGGAGAGAAGAATAGCTGCTCTCAAAATTCAATCTAGTAGTGCAACCACTGCACCAAGCATTTCAGAACCTAGAAGTGGAATTGCCAATGACATTCATTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAACTATAAATACTGCAGCACATCATGCATGCATGTACACAAGGAGATCCTAGAAGATGAATGA 1983 0.4206 MASNLPSPATKSSTTPSQEKRHRSIFEVPHNFFDSSLLLHSPHSLLSDHHFHDSHNVTLQTVEPSENDVVSGRRWTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTIAGKKIVKEEDFEVLTSELVKDYDVSSISGSDSDDDSENESQNQNRVRYKSGESLKQKLFVCLQTGQRVSVWKCLIMNMNESVLYDNEKEESKIVERLKSLTVEPRDNTRLRIVLLASGGHFAACVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEVQELFAAWRHYFDASNCIFIHAPSSSRLLLYDGERSYFTNQQSAIRNIPLTVRRPTFREAKRVYSQLTQVSYEADEKETLQSNQEDIVSIPNTIRNSSPPLRKGNMDELDHKDKAETFSIKQNDKLPISIDGESENELCDKSTPLHQAAHSDDSEKVMELLEQGLDPCIKDERGRTPYMLAHEKEVRNAFRRFMASNPDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQVEAALPKNASKPVEKQVTPSTSTTGQSRPKSGLKLSKEEELQRVLAEEREKRAAAAERRIAALKIQSSSATTAPSISEPRSGIANDIHCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILEDE* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0999 660 Coils Coil 573 601 - -
Lan13g0999 660 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Lan13g0999 660 SUPERFAMILY Ankyrin repeat 425 480 IPR036770 -
Lan13g0999 660 Coils Coil 501 539 - -
Lan13g0999 660 MobiDBLite consensus disorder prediction 1 15 - -
Lan13g0999 660 Gene3D - 397 493 IPR036770 -
Lan13g0999 660 Pfam Bacteroidetes VLRF1 release factor 219 357 IPR041175 -
Lan13g0999 660 ProSitePatterns Zinc finger C2H2 type domain signature. 77 99 IPR013087 -
Lan13g0999 660 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Lan13g0999 660 Pfam Vms1-associating treble clef domain 620 655 IPR041540 -
Lan13g0999 660 MobiDBLite consensus disorder prediction 132 154 - -
Lan13g0999 660 MobiDBLite consensus disorder prediction 548 566 - -
Lan13g0999 660 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 16 656 - -
Lan13g0999 660 MobiDBLite consensus disorder prediction 498 574 - -
Lan13g0999 660 MobiDBLite consensus disorder prediction 1 21 - -
Lan13g0999 660 MobiDBLite consensus disorder prediction 504 518 - -
Lan13g0999 660 SUPERFAMILY beta-beta-alpha zinc fingers 73 107 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0999 20 607 C2H2 Transcription Factor Family AT1G01930 52.254 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0999 K26089 - gmx:100527709 891.723