Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0997 ATGGTAGCTGATTTTTCTTCACGTGGACCAAATACAATTGTTCCAGAAATTATGAAACCAAATATAAGTGCCCTAGGAGTAGATATCTTGGCTTCATTTTCACAAGTTGTTTCTCCATCAGATAATGAATATGATAAAATATATGTCAAATATAACATAATATCAGGAACATCCATGTCATGCCCTCATGTTGCTGGAATAGCTGCATATTTGAAAACATTTCATTTGGGTTGGTCACCATCAGCCATCAAATATGCTATTATGACTTCATCAAAACCTAAGAAGGTTTCTAATGATGAAGTTGGTGAATATGCTTATGGATCTAGTAGCCATGTCAATCCTGTTCATGCTGTTCATCCTGGACTTATCTATGATATTTCCTTGGATGATTATATACAAATGCTTTGCAACTTGGGCTATGATAGCAAAAAGATCAAATTAATCTCTGGTAAGAACAATTCTTGCTCCAATGCTACTGATATATCCTTGGTGAGAGATCTCAATTATCCTGCTTTTGCTGATGTTAAGTCGAGGACAACTTTTACCATCAAATTTGAAAGAACAATCACTAATGTTTTCCAAGCAAAATCAATTTATAAGGCGTCAATTTTACCAAATCCAAAAATCAAAATTAGAGTTGTACCCGAGACTCTTGCATTCAAATCACTTAATGAGAAGCAGTCTTTTGTCCTTATGTGTTCAAAGAACAATTTTCATTAA 720 0.3389 MVADFSSRGPNTIVPEIMKPNISALGVDILASFSQVVSPSDNEYDKIYVKYNIISGTSMSCPHVAGIAAYLKTFHLGWSPSAIKYAIMTSSKPKKVSNDEVGEYAYGSSSHVNPVHAVHPGLIYDISLDDYIQMLCNLGYDSKKIKLISGKNNSCSNATDISLVRDLNYPAFADVKSRTTFTIKFERTITNVFQAKSIYKASILPNPKIKIRVVPETLAFKSLNEKQSFVLMCSKNNFH* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0997 239 ProSitePatterns Serine proteases, subtilase family, serine active site. 56 66 IPR023828 -
Lan13g0997 239 Gene3D - 135 238 - -
Lan13g0997 239 Pfam Fibronectin type-III domain 166 236 IPR041469 -
Lan13g0997 239 ProSiteProfiles Serine proteases, subtilase domain profile. 1 118 - -
Lan13g0997 239 Pfam Subtilase family 2 99 IPR000209 GO:0006508|GO:0008236
Lan13g0997 239 Gene3D Peptidase S8/S53 domain 1 131 IPR036852 GO:0004252|GO:0006508
Lan13g0997 239 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 236 IPR045051 -
Lan13g0997 239 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 236 - -
Lan13g0997 239 SUPERFAMILY Subtilisin-like 2 101 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0997 Lan-Chr13 14494459 14495178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0997 1 238 Subtilisin-like Serine Gene Family AT5G59100 48.148 1.56e-73 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0997 - - lang:109363628 479.174