Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0985 ATGGCATTCAAAGTTCATCAACCCATCTTCTCCGACAATGATGGCACCTCTTACAATAATGATATGGTCTATATTACTGTGGTTGTGGCATCTAAAGCTAATAATCAGTGCAACTTTGCTCGCTTGCCATTTCCAATATATCGCAACCTTTTTTCTTATGATGATATCTGCCATGGGATAGTAACAACGTTCCTTGAAAGCATGAAGATACCACCAACTTTTTTCGATGGAGGTGGCTGTAACATGGTTGAAAACCTTTCAAGAATGTTACGTACAGCAACACTGCAACACCATAGGCTTCATTTGTGTGTTGTTATGATGGTATTTGAGGGTTCTTGTAGGTACAAGATACTGAATTCTTCACAACCCTTTGATGCTGAGCAATTTCCTTCAAGTGGGTTTGTAGAATTGGCTTGTGAAGGTGGTGAATGTTCTTTTCCTGCATCATGGGCTGAAGATGAAGAAGATAAATGTGCCATATGCTTTGAAGGGTACCCCTCTCATAGGGATGCAGAAATGTTACCTTGTTCCCATGTTTTCCATCAAAGTTGTATCATGAAATGGTTTCAAAGAAGTCCTACATGCCCTAAGTGTCGATTCATTATGCCTTATCAGTTGTTACCATGA 627 0.3971 MAFKVHQPIFSDNDGTSYNNDMVYITVVVASKANNQCNFARLPFPIYRNLFSYDDICHGIVTTFLESMKIPPTFFDGGGCNMVENLSRMLRTATLQHHRLHLCVVMMVFEGSCRYKILNSSQPFDAEQFPSSGFVELACEGGECSFPASWAEDEEDKCAICFEGYPSHRDAEMLPCSHVFHQSCIMKWFQRSPTCPKCRFIMPYQLLP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0985 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 206 IPR013083 -
Lan13g0985 208 SMART ring_2 158 198 IPR001841 -
Lan13g0985 208 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
Lan13g0985 208 SUPERFAMILY RING/U-box 149 205 - -
Lan13g0985 208 Pfam Ring finger domain 156 199 IPR001841 -
Lan13g0985 208 PANTHER GB|AAF27103.1 118 203 - -
Lan13g0985 208 PANTHER TARGET OF ERK KINASE MPK-1 118 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0985 Lan-Chr13 14269494 14270120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0985 154 199 C3H Transcription Factor Family AT4G12190 44.898 2.87e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0985 - K11982 lang:109363624 449.129