Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0984 ATGGCATTCAAAGTTCATCAACCCTACAATGGTGGCACCTCTTACAACCATGGTAATATGGTCTATATTAATGTGGTTGTGGCATCTGAAGCTAATAACCAACGCAACTTTGCTCGTTTGCCATTTCCAATATCTCGCAACCTTTTTTCTTATGATGATATCTGCCATGGGATAGTAACAACGTTCCTTGAAAGCATGAAGATACCACCAACTTTTTTCAATGGAGGTGGCTGTAACATGGTTGAAAACCTTTCAAGAATGTTACGTACAGAAACACTGCAACACCATAGGCTTCATTTGTGTGTTGTTATGATGGTATTTGAGGGTTCTTGTAGGTACAAGATACTGAATTCTTCACAACCCTTTGATGCTGAGCAATTTCCTTCAAGTGGGTTTGTAGAATTGGCTTGTGAAGGTGGTGAATGTTCATTTCCTGCATCATGGGTTGAAGATGAAGAAGATAAATGTGCCATATGCTTTGAAGGGTACCCGTCTCATAGGGATGCAGAAATGTTACCATGTTCTCATGTTTACCATCAAACTTGTATTATGAAATGGTTTCAAAGGAGTCCTACATGCCCTAAGTGTAGATTCATTATGCCTTATCAGTTGTTACCATGA 621 0.3929 MAFKVHQPYNGGTSYNHGNMVYINVVVASEANNQRNFARLPFPISRNLFSYDDICHGIVTTFLESMKIPPTFFNGGGCNMVENLSRMLRTETLQHHRLHLCVVMMVFEGSCRYKILNSSQPFDAEQFPSSGFVELACEGGECSFPASWVEDEEDKCAICFEGYPSHRDAEMLPCSHVYHQTCIMKWFQRSPTCPKCRFIMPYQLLP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0984 206 ProSiteProfiles Zinc finger RING-type profile. 156 197 IPR001841 -
Lan13g0984 206 SMART ring_2 156 196 IPR001841 -
Lan13g0984 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 204 IPR013083 -
Lan13g0984 206 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC 140 200 - -
Lan13g0984 206 Pfam Ring finger domain 154 197 IPR001841 -
Lan13g0984 206 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 140 200 - -
Lan13g0984 206 SUPERFAMILY RING/U-box 147 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0984 Lan-Chr13 14262872 14263492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0984 153 203 C3H Transcription Factor Family AT5G53910 43.137 1.43e-09 54.3