Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0947 ATGGGGAAGAGAGGAAAATGGCTTAGAAACTTCTTCACAGGAGGGAAGAAGAAAGACAAGGAAAAAAGTTTAACTAACTTGAGTGTTTCAATTATAACAGAAAAACCAACTACTCCAATATCAACAACCACTAAAGAGAAAAGAAGATGGAGTTTCAGGAGATCATCAGCCACAGCTACAGCTTCAAAGGAATTGAGTTTTGCAGAAGAAAATGAGCAGAAAAAGCATGCACAGCCTGCAAATGTTGTGATTTGCATGAATGATGATTCTAATGAAATATTTACAAGTTTAGAAGAGGCTGCTGCCATTAAAATCCAATCTGTCTTTAGATCCTACTTGGCTAGAAAAGCATTGTGTGCTCTTAGAGGACTAGTGAAGTTGCAGGCACTAGTAAGGGGTCACTTGGTGAGAAAACAAGCCATGGAGACACTAAGATGCATGCAGGCTTTGGTCATAGCGCAAACCAGAGCGCGCGCTCAGAGGGCTCGAATGGTATCAGAATCAAAGCCTAACCAAAATCAATCAACCTACAGAAAATCCACTGAGAATGATTTATTCAAACATATCTATAATGAAATGGACATAGGCTTGGAAGAGAACATCAAGATTGTGGAGATGGATGTTTGTGAAACAAAAGCTAACTCTAGAAGCAGAAACAGCAATGCAAATCATGAATTATCTGAGCATAGAATTGCTACGCATTATTCACAAAATGTTTCATACTCAAATGAAGAAAACTACAAATCGTCGCCTGCGCCATCAGCATTGACAGATTTGAGTCCGAGAGGCTGCAATGCGAATTTCGACGAATGTTCCTTCAGTACAACACAGAACAGTCCCTATTACTACTCTGATGTGTCAAGAGCTGAGGACTACAATCCTTATTCTGCTTTCCCTAGGCCACCCTATGCAGAATCCATGGCTTATGACTATCCATTATACCCAAACTACATGGCTAACACTGAATCATCAAGGGCTAAACTTAGATCACATAGTGCACCGAAGCAAAGGCCAGAGTCATATGAGAGGCAACCGAGCCGCCGAAGAATTTCGGTGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTTACTGCTCAAAATTACCAATATCCATGGTCAATAAAGCTTGATAAGTCTACAGTTTCACTCAAAGATAGTGAATGTGGTTCAACTAGTACAATGCTCACAAACTCTAATTACTGCAGATCACTTTTTGCATAG 1248 0.4062 MGKRGKWLRNFFTGGKKKDKEKSLTNLSVSIITEKPTTPISTTTKEKRRWSFRRSSATATASKELSFAEENEQKKHAQPANVVICMNDDSNEIFTSLEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQAMETLRCMQALVIAQTRARAQRARMVSESKPNQNQSTYRKSTENDLFKHIYNEMDIGLEENIKIVEMDVCETKANSRSRNSNANHELSEHRIATHYSQNVSYSNEENYKSSPAPSALTDLSPRGCNANFDECSFSTTQNSPYYYSDVSRAEDYNPYSAFPRPPYAESMAYDYPLYPNYMANTESSRAKLRSHSAPKQRPESYERQPSRRRISVEGRNVPRPVRMQRSSSHVGVTAQNYQYPWSIKLDKSTVSLKDSECGSTSTMLTNSNYCRSLFA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0947 415 Gene3D - 95 149 - -
Lan13g0947 415 Pfam IQ calmodulin-binding motif 100 118 IPR000048 GO:0005515
Lan13g0947 415 Pfam IQ calmodulin-binding motif 125 139 IPR000048 GO:0005515
Lan13g0947 415 PANTHER IQ-DOMAIN 5-RELATED 1 399 - -
Lan13g0947 415 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 399 - -
Lan13g0947 415 MobiDBLite consensus disorder prediction 328 355 - -
Lan13g0947 415 SMART iq_5 97 119 IPR000048 GO:0005515
Lan13g0947 415 SMART iq_5 120 141 IPR000048 GO:0005515
Lan13g0947 415 MobiDBLite consensus disorder prediction 35 57 - -
Lan13g0947 415 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Lan13g0947 415 Pfam Protein of unknown function (DUF4005) 274 355 IPR025064 -
Lan13g0947 415 MobiDBLite consensus disorder prediction 324 355 - -
Lan13g0947 415 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0947 Lan-Chr13 13371018 13373916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0947 1 413 IQD Protein Family AT4G14750 45.805 1.14e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0947 - - gmx:100817667 513.457