Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0946 ATGGCAGAAAAAGAAGAAAGAGGATCTAGTGCCACATCTCTGAAGGATCAAGGTAACGAGTTTTTCAAGTCAGGTAAATATCTCAAAGCTGCTGCACTCTATACTCAAGCCATCAAAAAGGACCCTTCTAATCCCACTCTTTATAGTAATCGGGCTGCAGCATTTCTGCAATTGGATAAGCTTAGTAAAGCCCTTGATGATGCTGAGACGACAATTAAACTAAAACCCGAATGGGAAAAGGGATATTTCAGGAAGGGAAGCATATTGGAGGCCATGAAACGATATGATGATGCCTTAGCTGCATTTCAGATAGCTTTGCAGTATAACCCCAAAAGTCAAGAAGTATCAAAAAAGATAAAGAACATAAACCAACTTGTGAGAGATAGCAAGCGAGCTCAAGAAGTCGAGAACATGAGGTCTAATGTTGACATGGCCAAACATTTAGATTCATTGAAACCTGAATTGTCTCGAAAGTATGGATCTGAAGAAAGCTGGAAAAATATGTTCCTTTTCCTAGTTGAAACTATGGAGACGGCTGTCAAAACCTGGCACGAGACTTCGTCTGTGGATGCTAGAGTTTACTTTCTTCTTGATAAGGACAAGACAGACACTGATAAGTATGCCCCAATTGTGAATATTGATAAGGCCTTTGAATCGCCAGATACACACAGCAACTGTTTTTCATACCTCAGACAGTATGCTGAGGAGTCTTTGTCTGGAGCAGCCTGCTTAGTTGTTCGCAAAAGCAGCATTGGTTATCCACAGATTTGGAAAGGCCAAGGATTGAGAAAGTGGAAAAATGCGCAAAATGATGGTTTCTTTGTTCAATTTGAGTCACCTTCCCTGCGAAAGCTGTGGTTTATTCCTAGTTCCAACGAAAAGGGACGAACATTCTGCAGGGACCCAGAGGTCTTAGACATCGGTGTTCATGAAGTTCTTCCCCGCTTATTCAAAGAAAAGCTGCCCAATTCTTAG 975 0.4144 MAEKEERGSSATSLKDQGNEFFKSGKYLKAAALYTQAIKKDPSNPTLYSNRAAAFLQLDKLSKALDDAETTIKLKPEWEKGYFRKGSILEAMKRYDDALAAFQIALQYNPKSQEVSKKIKNINQLVRDSKRAQEVENMRSNVDMAKHLDSLKPELSRKYGSEESWKNMFLFLVETMETAVKTWHETSSVDARVYFLLDKDKTDTDKYAPIVNIDKAFESPDTHSNCFSYLRQYAEESLSGAACLVVRKSSIGYPQIWKGQGLRKWKNAQNDGFFVQFESPSLRKLWFIPSSNEKGRTFCRDPEVLDIGVHEVLPRLFKEKLPNS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0946 324 Pfam Tetratricopeptide repeat 80 111 IPR013105 -
Lan13g0946 324 Gene3D Tetratricopeptide repeat domain 2 162 IPR011990 GO:0005515
Lan13g0946 324 PANTHER TPR REPEAT CONTAINING PROTEIN 11 320 IPR045248 GO:0006457|GO:0030544|GO:0051879
Lan13g0946 324 SUPERFAMILY TPR-like 11 122 IPR011990 GO:0005515
Lan13g0946 324 Pfam TPR repeat 18 58 - -
Lan13g0946 324 PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 11 320 - -
Lan13g0946 324 SMART tpr_5 79 112 IPR019734 GO:0005515
Lan13g0946 324 SMART tpr_5 45 78 IPR019734 GO:0005515
Lan13g0946 324 SMART tpr_5 11 44 IPR019734 GO:0005515
Lan13g0946 324 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Lan13g0946 324 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0946 11 122 U-box Gene Family AT3G07370 26.786 3.61e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0946 - - gmx:100790717 553.903