Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0937 ATGGAAAGTACTAGGCAGTGGTTTAGTAAGTTCATGCCGAAGGACAAAACGAAGTCTGCAAATGACAAGGAAACTAATGGCATAACAAAGCAAGGATCCAAACCCCCAACGAATGACGAAGCACCTTCTAATATAACGAAACAGAAGGTTGAAGCTGCAAAGCAGTACATTGAAAACCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGCGGAAGGAAAGACGTAATATCCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCCGAGGAAGAGCAGAACAACTTGCTTCACTATTTGGAGAGAAAGGAGACAGAATACATGCGCCTTATGAGACATAAGATGGGGCCCGATGACTTTGAGCCCCTCACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGACTCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTTGCTGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAAGGGTATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACGTTGCTGATGCGGAAGGATATACTAACAGAAGATGAGGCCCGGTTCTATGTTGGAGAGACTATCCTAGCCATTGAGTCAATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGTTAGATAGACACGGTCACATGAAATTATCAGATTTTGGGTTATGCAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTATTCGAAGTAACAGAAGTGGAGCTCTTCAGAGTGATGGACGTCCAGTGGCTCCTACACGAACGCAACAGGAACAACTGCAACATTGGCAGAAAAATAGGCGAATGCTTGCGTATTCTACAGTTGGAACGCCAGATTATATTGCTCCTGAAGTTCTACTGAAGAAAGGATATGGCCTGGAATGTGATTGGTGGTCTCTGGGAGCTATAATGTATGAAATGCTTGTAGGTTATCCACCCTTTTATTCAGATGAACCGATGTTGACTTGTCGAAAGATAGTAAATTGGAAAACTTATCTAAAATTTCCAGAAGAAGCTAAACTATCATCAGAGGCAAAGAATCTTATTTGTAGACTCCTATGTAATGTAGACCAGAGGCTTGGAACCAAAGGAGCCAATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGATAAATTGTACCAAATGAAGGCTGCTTTTATACCCGAGGTCAATGATGAATTAGATACCCAAAATTTTGAGAAGTTTGATGAGGTGGACAAGAAAACTGAATCCTCCTCAAATGCAGGCCCATGGAAAAAGATGCTGCCATCTAAGGATGTTAACTTTGTTGGCTACACGTATAAGAATTTCGAAATTTTGAATGATCATGAAATACCCGGAATTGCTGAATTGAAGAAGAAGAGCTCAAAACCTAAAAGGCCATCTATTAAGTCCCTATTTGATGATGAATCAGCTATGGCTTCCAATCAACCAATCAAAGGGAGCTTCTTAAACCTCTTACCTCATATGGAAGAAGTTTCTGAGAAAAGTGAATCACAATGA 1644 0.4069 MESTRQWFSKFMPKDKTKSANDKETNGITKQGSKPPTNDEAPSNITKQKVEAAKQYIENHYKKQMQSLQERKERRNILEKKLADAEVSEEEQNNLLHYLERKETEYMRLMRHKMGPDDFEPLTMIGKGAFGEVRLCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEGYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETILAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCSNLQEKDFSIRSNRSGALQSDGRPVAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWKTYLKFPEEAKLSSEAKNLICRLLCNVDQRLGTKGANEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFDEVDKKTESSSNAGPWKKMLPSKDVNFVGYTYKNFEILNDHEIPGIAELKKKSSKPKRPSIKSLFDDESAMASNQPIKGSFLNLLPHMEEVSEKSESQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0937 547 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 42 521 - -
Lan13g0937 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 521 - -
Lan13g0937 547 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0937 547 Coils Coil 68 88 - -
Lan13g0937 547 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Lan13g0937 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lan13g0937 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lan13g0937 547 Gene3D Transferase(Phosphotransferase) domain 1 203 268 - -
Lan13g0937 547 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan13g0937 547 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Lan13g0937 547 MobiDBLite consensus disorder prediction 1 48 - -
Lan13g0937 547 MobiDBLite consensus disorder prediction 24 48 - -
Lan13g0937 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan13g0937 547 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0937 547 MobiDBLite consensus disorder prediction 499 513 - -
Lan13g0937 547 CDD STKc_NDR_like 117 482 - -
Lan13g0937 547 MobiDBLite consensus disorder prediction 499 518 - -
Lan13g0937 547 MobiDBLite consensus disorder prediction 9 23 - -
Lan13g0937 547 SUPERFAMILY Protein kinase-like (PK-like) 93 460 IPR011009 -
Lan13g0937 547 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Lan13g0937 547 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0937 547 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0937 Lan-Chr13 13162338 13170971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0937 1 545 AGC Kinase Gene Family AT3G23310 79.562 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lan13g0937 Pkinase 8.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0937 K08790 - gmx:100795087 1005.74