Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0935 ATGTGTGGGATATTTGCGTATTTGAATTACAACGTGAACAGAGAAAGAAGCTACATATTACAGGTTCTGTTTAATGGGTTAAGGCGTTTGGAGTATCGCGGTTATGATTCCGCGGGAATCGCCATCGATTCTGCTTCATTTCTCTCTGTTAATGGCGATCCAAATTCCTCTTCCAATTCCATTTCTGCACACACTCCTCCTCCTCTCGTGTTTCGCCAGGAGGGAAATATTGAATCACTCGTTAAGTCCGTTTACCAAGAAGTGGCAGATGTGGAACTGAACTTGGAGGAATCATTTTTGACACATGCGGGAATAGCACATACTCGATGGGCAACTCACGGAGAGCCTGCTCCCAGGAACAGTCATCCTCAGTCATCTGGCCCTGAAGATGATTTCCTTGTTGTCCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGAAACACTTGTCCGACATGGCTTCATCTTTGAATCTGAAACCGACACGGAAGTCATTCCGAAGCTTGCAAAGTTTGTTTATGACAAAGCCAATGAAGCAGCAGGTGATCAGATTGTTACCTTCAGTCAAGTTGTCCTGGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATCTTCAAAAGTCGACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGTAGCCCACTGCTCTTAGGTGTTAAAGAATTGAGAGAAAATCAGGAAAATGGATCTGCATTTGAGGACAACAAATTCCTGTCAAAAGATGGACATCCTAAAGAATTGTTTTTGTCCAGTGATGCCCATGCTGTGGTTGAGCATACCAAGAAAGTGCTAGTTGTTGAGGATGGTGAAGTGGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAGTTTGAAAATGACAAGGGAGAACATGTTGGTCCTCTTTCCAGAGTTGCCTCAGTGCGACGTGCATTATCCATTCTCGAGATGGAGGTTGAGCAAATAAATAAAGGGCATTATGAGCATTATATGCAGAAGGAAATTCATGAGCAGCCAGAGTCTCTAACAACCACAATGAGGGGAAGGCTTATACGTCGAGGATCTAGCAAATCCAAGTCTGTTCTTCTGGGTGGACTGAAAGATCACCTCAAAACAATTAGGCGTAGTAGAAGGATAGTTTTCATTGGATGTGGCACAAGTTATAATGCTGCTTTGGCAGCGAGGCCCATCTTGGAGGAACTTTCTGGTATTCCTGTAACTATGGAAATTGCTAGTGACCTATTGGATAGGCAGGGACCAATATACCGAGAAGATACAGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTGCTTGCTTTGCAATATGCTTTAGATAATGGTGCATTATGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAAAACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACCAAGGCATACACAAGTCAAATAGTTGTCATGGCCATGTTGGCCCTTGCAATAGGAGGGGATACAATTTCCAGTCAAGCTAGAAGAGAAGCTATTGTAGATGGTCTATATGACCTTCCAAATAAAGTTAAAGAGGTTCTAAAGCTTGATCAGGAGATGAAGGATCTGGCACAGCTATTAATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGATCGTACAACTATGCTACTGCTCTAGAGGGAGCTTTGAAAGTGAAGGAAGTGGCACTGATGCATAGTGAAGGGATACTTGCTGGTGAAATGAAGCATGGCCCTCTGGCGTTAGTGGATGAAAATCTTCCGATTTTGGTCATTGCTACACGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTTATACAACAACTTCATGCCCGCAAAGGCCGCCTGATAGTTATGTGTTCGAATGGGGATGCAGCTTCTGTATGCCCTGGGGAATCTTGCAAGGTGATTGAAGTTCCACAGGTTGAGGACTGTCTTCAACCAGTAATTAATGTAGTTCCATTACAGTTACTGGCCTATCATCTCACTGTCCTGAGGGGATTTAATGTTGACCAGCCTCGAAATCTTGCCAAGAGTGTAACCACGCAATAA 2091 0.4338 MCGIFAYLNYNVNRERSYILQVLFNGLRRLEYRGYDSAGIAIDSASFLSVNGDPNSSSNSISAHTPPPLVFRQEGNIESLVKSVYQEVADVELNLEESFLTHAGIAHTRWATHGEPAPRNSHPQSSGPEDDFLVVHNGVITNYEVLKETLVRHGFIFESETDTEVIPKLAKFVYDKANEAAGDQIVTFSQVVLEVMRHLEGAYALIFKSRHYPNELIACKRGSPLLLGVKELRENQENGSAFEDNKFLSKDGHPKELFLSSDAHAVVEHTKKVLVVEDGEVVHLKDGGVSILKFENDKGEHVGPLSRVASVRRALSILEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRRGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISSQARREAIVDGLYDLPNKVKEVLKLDQEMKDLAQLLIAEQSLLVFGRSYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSNGDAASVCPGESCKVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0935 696 Pfam SIS domain 547 678 IPR001347 GO:0097367|GO:1901135
Lan13g0935 696 Pfam SIS domain 376 503 IPR001347 GO:0097367|GO:1901135
Lan13g0935 696 Gene3D - 328 695 - -
Lan13g0935 696 ProSiteProfiles SIS domain profile. 543 686 IPR001347 GO:0097367|GO:1901135
Lan13g0935 696 Gene3D - 532 681 - -
Lan13g0935 696 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 303 IPR029055 -
Lan13g0935 696 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 293 IPR029055 -
Lan13g0935 696 Pfam Glutamine amidotransferase domain 102 217 - -
Lan13g0935 696 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 696 - -
Lan13g0935 696 ProSiteProfiles SIS domain profile. 372 511 IPR001347 GO:0097367|GO:1901135
Lan13g0935 696 CDD SIS_GlmS_GlmD_2 538 694 IPR035490 -
Lan13g0935 696 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 287 IPR017932 -
Lan13g0935 696 CDD SIS_GlmS_GlmD_1 381 506 IPR035466 -
Lan13g0935 696 CDD GFAT 2 284 - -
Lan13g0935 696 SUPERFAMILY SIS domain 327 695 IPR046348 GO:0097367|GO:1901135
Lan13g0935 696 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 696 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0935 104 228 PRT Gene Family AT4G38880 30.233 7.09e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0935 K00820 - gmx:100792835 1202.19