Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0932 ATGGAAACAACACTTACTTGCATCCTCTGTGGTCGAATTCCTGCACCAAAATATAATAATAACCGTTATTCTTATGCCCCTTCCTTTTGCCTGTTAACTCGCAACACTACTAATGCTTATAACAAAAATAAGACCATCATCAAAACTAGTCTTCCCGTCAACAACAAACCGAGAAGACGAAGGACTCGAATAAAAACACCTTCGCCACTGGTACCATTGATTAAAGAGTCCAACGAGGAGCAAAGGCAACAAATCCAAGCCGTTGAGATAATCAATCATCAAAACGGAGACCCATTAGGATGGAAAGACCTCGGAAAAAGCGTTGTGAAGTGGATACGTCATAGTATGAGGGCTATGGCATCTGATTTGGCTTCAGCCGAGTTACAGGGAGAATTGGAATTCTCCGAGTTGAGGCAGAGAATGGGACCTGGGCTTAGTTTCGTTATCGAAGCGCAGCCTTATTTGAATGCTGTTCCTTTGCCTCTTGGACTTGAAGTTGTTTGCTTGAAGGCGTGCACTCATTATCCGACTTTGTTTGATCATTTTCAGAGAGAACTCCGCGAAGTTCTCAATGAGTTGCAGAGTAAGTCCTTGGTTCAGGATTGGCGCCAGACTGAGTCGTGGAAACTGCTTAAGGATCTTGCCAATTCAGCTCAGCATCGGGCGGTTGCAAGAAAGACAGTACAGCCGAAGATCGTCCAAGGCGTTTTGGGAATGGACTTAGAAAAGGTCAGGGCAATGCAGCAGAGGATTGATGAGTTCACCAGCAACATGTCCGAGCTGCTCTGGATTGAAAGGGATTCTGAATTGGAGTACACTCAGGAGGAATTGGACGCTGTTCCTAAACCAGATGACACTTCTGATTCATCAAAGCCGATCGAGTTCTTGGTTAGTCATAGCCAACCTCAGCAAGAACTCTGTGACACCATTTGTAATTTAACTGCCGTCAGTACCTCTACAGGACTTGGGGGAATGCATTCAGTGTTATTCAAGGTCGAAGGGAACCATCGGCTACCACCTACTACTCTTTCACCAGGAGACATGGTTTGTGTGAGAACATGTGACAGCAAGGGTGCAGTTACAACTGCTTGCATGCAAGGATTTGTTGACAATCTTGGAGATGATGGCTGTAGTATTAGTATTGGTTTAGAGTCACGCCATGGTGATTCTACATTTTCTAAACTATTTGGGAAGAGTGTGCGCATTGATCGTTTTCAAGGACTGGCTGATACTCTTACCTATGAGCGCAACTGTGAAGCCTTGATGCTTCTTCAGAAGAATGGTTTGCGCAAAAAGAATCCTTCAATTTTTGTTGTGGCTACACTCTTTGGAGACAGAGAAGATATTGCATGGCTTGAGAAGAATCATTTGGCTGACTGGGGAGAAGAAAATTTGAATGGTCTATTAGAAAATGAAAACTTCGATGATTCTCAGCGGAGAACAATTGCTCTGGGTTTGAATAAGAAGAGGCCTGTGTTGGTTATCCAAGGGCCTCCTGGTACAGGAAAGACTGGTATACTCAAGCATCTTATAGTATGTGCCGTTCATCAAGGAGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTTGACAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTGCGGGTTGGAAACCCTGCTCGTATATCAAAAACTGTGTCATCGAAGTCTTTGGCAGAAATTGTGAATGCTAAGCTTGCACCTTTTCGAGAAGAGTACGAGAGGAAGAAGTCAGATCTAAGGAAAGATCTAAGTCATTGTTTAAAGGATGACTCGCTCGCTGCTGGTATACGCCAACTTCTGAAACAGCTAGGGAGGTCGCTGAAGAAAAAGGAAAAGCAGACTATTAGCGAAGTTCTATCCGGTGCTCAGGTTGTGCTTGCTACTAATACTGCAGCAGCTGATCCTTTGATTCGAAGGCTGGATACTTTCGACTTAGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAGGGTAAGCGTTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTCTAGGAATATCTTTACTGGAGAGAGCTACAACTTTGCATGAAGGGATTCTCAACACCAGGTTAACAACACAATACCGTATGAACGATGCAATTGCTAGTTGGGCTTCAAAGGAGATGTACGGAGGATTGTTGAAGTCCTCTGAGACTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACATGGATAACACAATGCCCTCTGCTATTGCTTGATACTAGAATGCCATATGGAAGTCTGTCAATTGGTTGTGAAGAGCATCTAGACCCATCTGGAACAGGCTCACTATATAATGAAGGAGAAGCCAATATAGTTCTGCAGCATGTCTTTTCCTTAATTTACTCTGGTGTTAACCCAACTGCTATTGTAGTACAATCTCCTTATGTTGCTCAAGTACAACTTTTAAGGGACATGCTTGATGAGATCCCAGAGGCTACAGGTACCGAGGTTGCAACGATTGATAGCTTTCAAGGTCGGGAAGCTGATGCAGTAATTTTGTCCATGGTACGGTCGAACACATTGGGAGCTGTTGGATTCCTTGGAGATAGCAGAAGAATCAATGTTGCCATCACAAGAGCACGAAAGCATGTAGCCGTCGTGTGTGACAGCTCAACCATATGCCACAACACCTTCCTAGCAAGACTTCTGCGTCATATCCGGCACTTTGGTCGGGTGAAGCATGTGGAACCAGGTAGTTTTGGAGGATCTGGACTTGGGATGGGTCCATTATTACCTTCAATTGATTAA 2847 0.4387 METTLTCILCGRIPAPKYNNNRYSYAPSFCLLTRNTTNAYNKNKTIIKTSLPVNNKPRRRRTRIKTPSPLVPLIKESNEEQRQQIQAVEIINHQNGDPLGWKDLGKSVVKWIRHSMRAMASDLASAELQGELEFSELRQRMGPGLSFVIEAQPYLNAVPLPLGLEVVCLKACTHYPTLFDHFQRELREVLNELQSKSLVQDWRQTESWKLLKDLANSAQHRAVARKTVQPKIVQGVLGMDLEKVRAMQQRIDEFTSNMSELLWIERDSELEYTQEELDAVPKPDDTSDSSKPIEFLVSHSQPQQELCDTICNLTAVSTSTGLGGMHSVLFKVEGNHRLPPTTLSPGDMVCVRTCDSKGAVTTACMQGFVDNLGDDGCSISIGLESRHGDSTFSKLFGKSVRIDRFQGLADTLTYERNCEALMLLQKNGLRKKNPSIFVVATLFGDREDIAWLEKNHLADWGEENLNGLLENENFDDSQRRTIALGLNKKRPVLVIQGPPGTGKTGILKHLIVCAVHQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKTVSSKSLAEIVNAKLAPFREEYERKKSDLRKDLSHCLKDDSLAAGIRQLLKQLGRSLKKKEKQTISEVLSGAQVVLATNTAAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATTLHEGILNTRLTTQYRMNDAIASWASKEMYGGLLKSSETVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDPSGTGSLYNEGEANIVLQHVFSLIYSGVNPTAIVVQSPYVAQVQLLRDMLDEIPEATGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHVEPGSFGGSGLGMGPLLPSID* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0932 948 CDD DEXXQc_SMUBP2 473 723 - -
Lan13g0932 948 SMART ultradead3 470 721 IPR014001 -
Lan13g0932 948 Pfam AAA domain 474 690 IPR041677 GO:0004386
Lan13g0932 948 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 63 947 - -
Lan13g0932 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 911 IPR027417 -
Lan13g0932 948 Gene3D - 722 930 IPR027417 -
Lan13g0932 948 Coils Coil 575 595 - -
Lan13g0932 948 CDD SF1_C_Upf1 724 920 IPR041679 -
Lan13g0932 948 Gene3D - 302 408 - -
Lan13g0932 948 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 63 947 - -
Lan13g0932 948 Gene3D - 409 706 IPR027417 -
Lan13g0932 948 Pfam AAA domain 700 903 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0932 Lan-Chr13 13065237 13075039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0932 460 663 Core DNA Replication Machinery Family AT1G08840 26.214 6.61e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0932 - - aip:107625008 1509.58