Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0930 ATGGCTTCATCGTCACTTCCATCTTTAGTGTTTGAAGTTAATAGGAAAGAGCCAGAGCTAGTAGCTCCAGCAAAACCAACCCCTCATGAAGTGAAACTACTCTCAGACATAGATGACCAAGATAGCCTACGTTTCCAAATCCCAGTGATACAATTCTATCGATATGACCCATCATTGGCAGGGAAAGACCCTGTTGATGTGATTAGAAAGGCACTGGCCAAAACATTAGTGTTTTATTACCCTTTTGCAGGTAGGCTTAGGGAAGGACCTAGTAGGAAACTCATGGTGGATTGTAGTGGGGAGGGTGTGTTATTTATTGAGGCTGATGCAGATGTAACACTTAACCAATTTGGTGATGCTCTTCAACCTCCATTTCCATGTTGGGAGGAGCTCCTTTATGATGTTCCTGGCTCTCAAGGAGTCCTCAACACTCCCTTGCTGCTTATACAGGTAACACGTCTCAAGTGTGGTGGCTTCATCTTTGCCCTACGGCTAAACCACACTATGAGCGATGCAGCTAGCTTGGTCCAATTCATGACAGCGGTGGGTGAAATGGCTCAGGGAGCTACTGAACCTTCAATTCTACCGGTGTGGCGTAGGGAGCTTCTGAATGCAAGGGACCCACCAAGAGTAACATGTACCCATCGAGAATACGAGCAAGTTCCTGATACTAAAGGAACCATTATCCCTTTGGATGATATGGCTCATCGCTCCTTCTTCTTTGGTCCAACTGAGGTAGCTGCAATTCGACATCTGATTCCACCCCACCAACACAAGTGTTCCAACTTCGAAATCCTTACCGCATGCCTCTGGCGTTGCAGAACAATCGCTTTGCAACCCGAAAATGATGAAGAAGTTCGCATTATTTGTATAGTAAACGCTCGTTCCAAGTTTAACCCTCCATTACCACGTGGTTACTACGGCAACGCTTTCGCTTTTCCGGTGGCTGTCACCACCGCAGGAAAGCTTAGTGAGAATCCACTAGGCTATGCATTAGAGTTAGTGAGGAAAGCAAAAGCTGATGTGACTGAAGAGTACATGCATTCTGTGGCGGATTTAATGGTCACTAAAGACCGACCACATTTTACTGTGGTCAGGTCTTATCTAGTGTCAGATGTGACACGTGCTGGGTTTGGCGATGTGGATTTTGGTTGGGGGAAAGCTGTTTATGGTGGACCTGCTAAGGGAGGTGTTGGAGCAATACCTGGTGTTGCTAGTTTTTATATACCCTTTGAGAATGCTAAAGGTGAGGATGGTTTGGTAATTCCAGTTTGTTTGCCTTCAGAAGCAATGGAGAGGTTTGTTAAAGAGTTGGATAATGTTCTTAAGAACAATCATGTCCAACAACCTATGTCAAGTTTAATTGTCTCTTCGTTATAG 1380 0.4507 MASSSLPSLVFEVNRKEPELVAPAKPTPHEVKLLSDIDDQDSLRFQIPVIQFYRYDPSLAGKDPVDVIRKALAKTLVFYYPFAGRLREGPSRKLMVDCSGEGVLFIEADADVTLNQFGDALQPPFPCWEELLYDVPGSQGVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAASLVQFMTAVGEMAQGATEPSILPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPTEVAAIRHLIPPHQHKCSNFEILTACLWRCRTIALQPENDEEVRIICIVNARSKFNPPLPRGYYGNAFAFPVAVTTAGKLSENPLGYALELVRKAKADVTEEYMHSVADLMVTKDRPHFTVVRSYLVSDVTRAGFGDVDFGWGKAVYGGPAKGGVGAIPGVASFYIPFENAKGEDGLVIPVCLPSEAMERFVKELDNVLKNNHVQQPMSSLIVSSL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0930 459 PANTHER - 10 446 - -
Lan13g0930 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 446 - -
Lan13g0930 459 Pfam Transferase family 12 438 - -
Lan13g0930 459 Gene3D - 9 218 IPR023213 -
Lan13g0930 459 Gene3D - 219 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0930 Lan-Chr13 12984421 12988352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0930 12 438 Monolignol Biosynthesis Gene Families AT5G48930 30.405 3.52e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0930 K19861 - gmx:100797017 801.201