Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0926 ATGAGCTCGAAGGAGAGACCCACTCTCGGTGGTACGCGGATTAAGACCCGCAAACGGAATATCGCAGCGCCGCTGGACCCTGCAGCATTCTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTATTGCTAAGAGCATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCATCGGCTGTCGTACACAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTATAATAGAGTGTGAGCCCAAGCGTGAATTCATCTTACCATCTGTTATTTACATACAGAAGATTTTGCGACGAAGGCCGTTTCTCATCAAGAACCTGGAAAATGTCATGCGAAAATTCCTTCAGTCATTGGAACTTTTCGAGGAAAATGAGAGGAAAAAGTTGGCAATTTTCACAGCACTTGCATTCTCCCAGAAGTTGTCTGGTCTTCCGCCAGAGACTGTGTTTCAACCACTTCTTAAAGATAACCTTGTGGCCAAAGGGCTAGTTCTGTCATTTATGACTGACTTCTTTAAGGAGTATCTGATTGACAACAGCCTTGATGATCTTATTTCAATTCTGAAAAGGGGAAAAGTTGAGGATAATCTTTTGGATATTTTCCCCCCTGCAAAAAGATCTAATGAGTCTTTCTCTGAACATTTCTCCAAGGAAGGACTGGTGGCCTTGGTGGAGTATAATGAAAAGAAAATATTTGAGGTGAAACTTAAGGAAATGAAGTCTGCCTTAACAACACAGATTACAGAGGAGGCTGATATATCTGAAGTCATTGAAACTGTGAAGCTGCAAGTTAGAGATGCTAAATTGCCAGACATTGAGGTTGTGCGAGTATTGTGGGATGTTTTAATGGACGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATTCAAATGCAGCCCTGCGCCAGGTAAAAACTTGGTCTGAGCTGTTGAATACATTCTGCACCACTGGGAAGCTTGAGCTGGAACTGTTGTACAAAGTACAGATGCAATGCTATGAGGATGCTAGATTGGTGAAGCTGTTCCCTGAGATTGTTAGATCGCTTTATGAGGCGGATGTGCTGGCCGAGGATACCATTCTTCACTGGTTCCGAAAAGGAACAAACACCAAGGGCAGGCAAAACTTTACTAAGGCACTCGAACCCTTTGTTAATTGGCTGGAGGAGGCAGAAGAGGAAGAGTAA 1236 0.4377 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKSIESSDLNFSRYGDTFFEVVFIGCRTQPGTTKPDEGERHPYSIIECEPKREFILPSVIYIQKILRRRPFLIKNLENVMRKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFMTDFFKEYLIDNSLDDLISILKRGKVEDNLLDIFPPAKRSNESFSEHFSKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEEADISEVIETVKLQVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNSNAALRQVKTWSELLNTFCTTGKLELELLYKVQMQCYEDARLVKLFPEIVRSLYEADVLAEDTILHWFRKGTNTKGRQNFTKALEPFVNWLEEAEEEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0926 411 SMART 542_3 325 410 IPR003307 GO:0005515
Lan13g0926 411 Coils Coil 404 411 - -
Lan13g0926 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
Lan13g0926 411 Gene3D - 243 411 - -
Lan13g0926 411 CDD W2_eIF5C_like 216 404 IPR043510 -
Lan13g0926 411 SUPERFAMILY ARM repeat 253 408 IPR016024 -
Lan13g0926 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Lan13g0926 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Lan13g0926 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Lan13g0926 411 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0926 Lan-Chr13 12663543 12668682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0926 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 29.091 6.41e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0926 - - gmx:100782537 768.074