Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0910 ATGTTCCTCAAAACCCACTCTTTGTTCCTCACCTTTCTTTTCATCACCGCCGCCACCACCACCACCATCGCCGCCGCCATCTCCCCAGGTTCTACTCTCTCAGCCTCTAACATAAACCAAACATGGTCCTCACAAAGCGCCACTTTCTCTCTCGGCTTCGTCCCCGCCAACCCACCCACCACCCCTCCCACCTTCATCGTCGCCATCGTTTACTCCGGCGGCTCCCCCGTCGTTTGGTCTGCCGGAAAATCCGCCGTTGACTCTTCTGGGTCGTTCCAATTCCTCCAATCAGGATCCCTCCGCCTAGTCAACGGCTCCGGCGCCACCGTGTGGGACTCCGGCACCACTGGCGCCACCTCTGCTACTCTTGAAGAAACCGGAAACCTTGTTCTTTCAAACAGCACCGCCACAGTCTGGTCAACGTTTGACCAACCAACAGATACTATTTTACCTTCTCAGAATTTCAGTGTTGGTAATACTCTCAGATCTGGTTCTTACTCTTTCACTCTTCTCAATAATGGAAACTTAACTTTGAGGTGGAATGATAGTGTATTGTTCTATAATCAAGGGTTGAATTCTTCTGTTAATGTTAGTTTAAACAAACCTATGTTGAGTTTACAATCTATTGGGATTTTGCAACTTTCTGATGCAAAATTGAGTACTCCTGTTGTTGTTGCCTATAGTAGTGACTATGCCGAAGGGAGCAATGTTTTGCGGGTTTTGAAATTGGATAAAGATGGGAACTTGAGGATTTATAGCACTTCTAAGGGTAGTGGAAGTTCTACTCCTGGGTGGGCTGCTGTTCAGGATCAATGTGATGTTTACGCTTATTGTGGGAATTATGGTATTTGTAGTTATAACGATTCGAATCCGATTTGCGGTTGCCCGTCTCAGAATTTTGAGATGGTTGATCCGAATGATAGTCGGAGAGGGTGTAGGAGGAAGGTGAGTCTTGATAGTTGTCAAGGGAGTGCGACTATGTTGACAATGGATCATGCTCAGTTCTTGACTTATCCACCTGAGAGTGAGTCACAGGTGTTTTACATTGGTATATCGGCTTGTAGAGGGAATTGTCTTTCGGGATCCGGTGCTTGTTTTGCTTCTACTTCCTTGTCTGATGGCACGGGACAGTGTTATATAAAGTCGGAAGATTTTGTCAGTGGTTATCATAATCCAGCATTGCCGAGTACTTCTTATGTTAAGGTTTGTCCTCCAGTGGAGCCAAATCCGGCACCCTCGTTAGGGGAGACCGCTAAGGAGAAGAGTACAGGTGTACCAGCTTGGGTTGTTGTGGTTGTCATTTTTGGTACCCTTGTAGGTTTGGTTGCCTTAGAAGGTGGGCTATGGATTTGGTGCTGTAAGAACAGCAAGAGGTTTGGTGGATTGTCTACTCAATATGCTCTACTTGAGTATGCTTCAGGTGCACCGGTTCAGTTTTCATACAAGGAGCTTCAGCGCTCGACAAAAGGGTTCAAGGAGAAGCTTGGAGCTGGTGGTTTCGGTGCCGTGTACAGAGGAGTTCTAGTGAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCTACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTCATTGGCTTTTGCTCGGAAGGGCGCCACAGGCTTTTAGTTTATGAGTTCATGAAAAACAGTTCTCTTGATAACTGTCTGTTCTTGTCAGAAGAACATTCAGGAAAATTGTTGAATTGGGAGCATCGATACAGCATTGCCTTGGGCACTGCTAGGGGCATCACATACCTTCACGAGGAATGTCGTGACTGCATTGTCCATTGTGATATAAAACCTGAAAACATTCTCTTGGATGGTAGTTACATTGCTAAAGTCTCAGATTTTGGCCTCGCCAAACTTGTAAGTCCCAAGGACCATAGGCACCGGACCTTGACAAGTGTGAGAGGTACCAGAGGATATTTAGCTCCAGAGTGGATTGCAAATCTTCCTATAACATCGAAATCCGACGTGTACAGTTATGGCATGGTTTTGCTAGAGATTGTGAGTGGGAGGAGGAATTTTGAAGTATCAGATGAAACAAATCGGAAAAAGTACTCCATTTGGGCGTACGAAGAGTTCGAGAAAGGCAACATTGATGCAATTGTGGACAAAAGATTAGCTGATCAAGAAGTTGATATGGAGCAAGTTGGAAGAGCGATTCAAGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAAAGACCGATGATGAGCCGAGTGGTCCAAATGCTAGAAGGGGTAATGGAGATTGAGAAGCCACCTGCTCCAAAGTCAGTGATGGAAGGACCTGTTAGTGGAACCAGCACATTCATAAGTAGCAATGCCAGTGCATTCTCGACGGTTGCAGCTTCACCCCATGTTCCCTCATCGTCATCATCGTTCCATATTAGCAGCGTTTCGACCTTTGCCTCGGGAAAGAACACCGACAAAGCCACTTCATCCCTTTTACAATCAGTACCATGA 2520 0.4599 MFLKTHSLFLTFLFITAATTTTIAAAISPGSTLSASNINQTWSSQSATFSLGFVPANPPTTPPTFIVAIVYSGGSPVVWSAGKSAVDSSGSFQFLQSGSLRLVNGSGATVWDSGTTGATSATLEETGNLVLSNSTATVWSTFDQPTDTILPSQNFSVGNTLRSGSYSFTLLNNGNLTLRWNDSVLFYNQGLNSSVNVSLNKPMLSLQSIGILQLSDAKLSTPVVVAYSSDYAEGSNVLRVLKLDKDGNLRIYSTSKGSGSSTPGWAAVQDQCDVYAYCGNYGICSYNDSNPICGCPSQNFEMVDPNDSRRGCRRKVSLDSCQGSATMLTMDHAQFLTYPPESESQVFYIGISACRGNCLSGSGACFASTSLSDGTGQCYIKSEDFVSGYHNPALPSTSYVKVCPPVEPNPAPSLGETAKEKSTGVPAWVVVVVIFGTLVGLVALEGGLWIWCCKNSKRFGGLSTQYALLEYASGAPVQFSYKELQRSTKGFKEKLGAGGFGAVYRGVLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNCLFLSEEHSGKLLNWEHRYSIALGTARGITYLHEECRDCIVHCDIKPENILLDGSYIAKVSDFGLAKLVSPKDHRHRTLTSVRGTRGYLAPEWIANLPITSKSDVYSYGMVLLEIVSGRRNFEVSDETNRKKYSIWAYEEFEKGNIDAIVDKRLADQEVDMEQVGRAIQASFWCIQEQPSQRPMMSRVVQMLEGVMEIEKPPAPKSVMEGPVSGTSTFISSNASAFSTVAASPHVPSSSSSFHISSVSTFASGKNTDKATSSLLQSVP* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0910 839 Gene3D - 145 268 IPR036426 -
Lan13g0910 839 ProSiteProfiles Bulb-type lectin domain profile. 146 264 IPR001480 -
Lan13g0910 839 CDD STKc_IRAK 495 765 - -
Lan13g0910 839 ProSiteProfiles Protein kinase domain profile. 489 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0910 839 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Lan13g0910 839 SUPERFAMILY Protein kinase-like (PK-like) 471 764 IPR011009 -
Lan13g0910 839 Pfam D-mannose binding lectin 78 157 IPR001480 -
Lan13g0910 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 190 IPR036426 -
Lan13g0910 839 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 8 827 - -
Lan13g0910 839 Gene3D Transferase(Phosphotransferase) domain 1 564 776 - -
Lan13g0910 839 Gene3D - 19 143 IPR036426 -
Lan13g0910 839 SMART blect_4 33 145 IPR001480 -
Lan13g0910 839 Pfam S-locus glycoprotein domain 232 296 IPR000858 GO:0048544
Lan13g0910 839 ProSiteProfiles Bulb-type lectin domain profile. 18 144 IPR001480 -
Lan13g0910 839 Pfam Protein kinase domain 492 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0910 839 Gene3D Phosphorylase Kinase; domain 1 460 563 - -
Lan13g0910 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Lan13g0910 839 PIRSF SRK 1 819 IPR024171 GO:0004674
Lan13g0910 839 PANTHER OS07G0415500 PROTEIN 8 827 - -
Lan13g0910 839 SMART serkin_6 489 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0910 Lan-Chr13 12160961 12163668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0910 462 773 Receptor kinase-like Gene Family AT5G20050 42.769 1.74e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan13g0910 Pkinase 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0910 - - gmx:100795819 1296.95