Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0872 ATGGGCAATACTTGTGTTGGCCCAAGCATTCCGAAAAATGGTTTTCTTCATTCAGTTTCTGCAGCAATGCGGTGGTCGCAATCATCGGAAGGATCGGTATCGAAGTCTAATAGAGAAACTGCAAATGAGGAAACAACTAAAGAGCCTGAATCACCCTTGCCTGTCCAAAGCAAACCCCCTGAGCAGATAACTATGCCGAAACCAGAACCAAAACAAGAAACAGAATCAGAAGTAGAACCCGAACCTGAACCTGAACCTGAACCCGAACCGGAACCGGAACAGGAAAAGGAGAAGAAGAAAACCAAGAAGCCTGATCCTGTGAAGAGAGTTTCAAATGCAGGACTTCAAGTTGATTCTGTGTTACAAACAGAAACTGGTAATTTCAAGGAATTCTTCAGTCTGGGGAGGAAACTCGGACAGGGTCAGTTTGGGATAACATTCTTGTGTATCGAGAAGGCGACAGGACACGAATATGCCTGTAAATCTATTGCGAAGAGGAAGCTGGTAACTGATGAGGATGTTGAGGATGTGAGAAGAGAAATTCAAATTATGCACCACTTGGCTGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAGGATGCAGTGGCAGTTCATGTTGTGATGGAGTTATGTGCCGGTGGTGAGCTTTTCGATAGAATTATTCAACATGGACATTATACTGAAAGACAGGCAGCTGACCTCATTAGGACTATAGTTGGTGTCGTGGAAGCTTGTCACTCTCTAGGTGTGATGCACAGAGACCTTAAACCTGAGAATTTTCTCTTCGTCAATAAACAGGAGGATTCACCTCTCAAAACCATTGACTTCGGATTATCCATGTTCTTTAAGCCAGGTGAAGTATTTGTGGATGTAGTTGGCAGTCCATATTACGTTGCTCCAGAGGTTTTGCGAAAGCGTTACGGTCCTGAAGCGGATGTTTGGAGTGCTGGGGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGTCTGAAAGTGAACAAGGAATATTTGAGCAGATTCTGCGTGGTGATCTTGACTTCGATTCAGATCCCTGGCCTCAAATTTCTGAAAGTGCAAAAGATTTAGTAAGGAAAATGCTCGTTCGTGACCCTAGATGGAGGATGACCGCGCATCAAGTATTATGTCATCCATGGATTCAAGTTGATGGTGTGGCTCCTGACAAGCCACTTGATTCCGCTGTATTAAGTCGCTTGAAGCAATTTTCTGCGATGAACAAGCTCAAGAAAATGGCTCTTATAGTTATTGCAGAGAGCTTATCTGTAGAAGAAATAGCTGGCTTGAAAGAAATGTTCAAGATGATAGATACAGACAATAGTGGTCAAATCACTTTTGAAGAACTTAAAGCTGGTTTGAAAAGAGTTGGTGCTAATCTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCAGCTGATGTAGATAACAGTGGAACAATTGATTATGGCGAGTTCATTGCTGCAACATTGCATCTAAACAAGATTGAAAGAGAAGATCATCTGTTTGCAGCCTTTTCGTACTTCGATAAAGACGGAAGTGGCTATATTACTCCAGATGAACTTCAACAGGCTTGTGATGAGTTTGGCATAGGTGATGTCCGGTTGGAGGAGATGATCGGAGAAATCGATGAAGACAATGATGGAAGAATAGATTATAATGAATTTGTGGCCATGATGCAGAAAGGAAATGTTCCTATGATTGGTAGGAAAGGCTTAGAACATAGCTTCAGCATTGGTTTCAAGGGGGCATTCAAACACTAG 1788 0.4217 MGNTCVGPSIPKNGFLHSVSAAMRWSQSSEGSVSKSNRETANEETTKEPESPLPVQSKPPEQITMPKPEPKQETESEVEPEPEPEPEPEPEPEQEKEKKKTKKPDPVKRVSNAGLQVDSVLQTETGNFKEFFSLGRKLGQGQFGITFLCIEKATGHEYACKSIAKRKLVTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQHGHYTERQAADLIRTIVGVVEACHSLGVMHRDLKPENFLFVNKQEDSPLKTIDFGLSMFFKPGEVFVDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWSESEQGIFEQILRGDLDFDSDPWPQISESAKDLVRKMLVRDPRWRMTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSVEEIAGLKEMFKMIDTDNSGQITFEELKAGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITPDELQQACDEFGIGDVRLEEMIGEIDEDNDGRIDYNEFVAMMQKGNVPMIGRKGLEHSFSIGFKGAFKH* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0872 595 ProSitePatterns EF-hand calcium-binding domain. 552 564 IPR018247 -
Lan13g0872 595 MobiDBLite consensus disorder prediction 23 39 - -
Lan13g0872 595 ProSitePatterns Protein kinases ATP-binding region signature. 138 165 IPR017441 GO:0005524
Lan13g0872 595 SMART efh_1 437 465 IPR002048 GO:0005509
Lan13g0872 595 SMART efh_1 509 537 IPR002048 GO:0005509
Lan13g0872 595 SMART efh_1 473 501 IPR002048 GO:0005509
Lan13g0872 595 SMART efh_1 543 571 IPR002048 GO:0005509
Lan13g0872 595 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Lan13g0872 595 CDD EFh 438 497 IPR002048 GO:0005509
Lan13g0872 595 CDD STKc_CAMK 131 389 - -
Lan13g0872 595 Pfam Protein kinase domain 133 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0872 595 MobiDBLite consensus disorder prediction 91 107 - -
Lan13g0872 595 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Lan13g0872 595 CDD EFh 509 569 IPR002048 GO:0005509
Lan13g0872 595 MobiDBLite consensus disorder prediction 23 111 - -
Lan13g0872 595 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 73 579 - -
Lan13g0872 595 SMART serkin_6 132 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0872 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 579 - -
Lan13g0872 595 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Lan13g0872 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Lan13g0872 595 ProSiteProfiles EF-hand calcium-binding domain profile. 543 574 IPR002048 GO:0005509
Lan13g0872 595 ProSiteProfiles Protein kinase domain profile. 132 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0872 595 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Lan13g0872 595 Pfam EF-hand domain pair 508 569 IPR002048 GO:0005509
Lan13g0872 595 Pfam EF-hand domain pair 438 498 IPR002048 GO:0005509
Lan13g0872 595 SUPERFAMILY EF-hand 430 570 IPR011992 -
Lan13g0872 595 SUPERFAMILY Protein kinase-like (PK-like) 132 391 IPR011009 -
Lan13g0872 595 Gene3D - 415 574 - -
Lan13g0872 595 Gene3D Transferase(Phosphotransferase) domain 1 218 414 - -
Lan13g0872 595 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Lan13g0872 595 Gene3D Phosphorylase Kinase; domain 1 134 217 - -
Lan13g0872 595 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0872 Lan-Chr13 10483980 10489911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0872 1 590 EF-hand Containing Proteins AT5G04870 76.346 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan13g0872 Pkinase 1.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0872 K13412 - gmx:100819792 967.607