Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0870 ATGCCGATTTATCAGCATATCAACTCGTCCTCGACTCAGTGGACTGTTGTTCATGACAAAGCTTTCCAGCGAGCCATTGTGATGTTACCGGAGAATATTCCTAACCGTTGGGAGACGATGACGCATCATGTTCCCGGGAACTGGTCACCGGAGGATTTGAAGCAACGGTACGAGAAGTTGGAACATGACTTGTTGATGATTGTGTCTGGTGAGGTTGAGTTTCCAGAATTGTTGAATAAGGTGGAACCAGCGGAGGTGCACCAAGGAACGCTGGCTGTGCCTGATGATTGGAAGAAAGGGACGTTATGGACCCTAGAAGAACACAGATTGTTTGTCCGTGGGCTTGAAAAATGTGGCAAAGGAGATTGGAAAGGAATTGCAACTGAGTTTGTTGTATCAAGAACTCCAAGTGAAGTTGCAAGTCATGCACAGAAATATTTTCTTCGTCAGAACACCACAAATGATGATAGGAAAAGAAAAAGCATCCATGACATAACCACTGGAGAATCGGATCAAACCTCAGTCTCACTTCCTCGCTTTAATAAAAAAACATAA 555 0.4414 MPIYQHINSSSTQWTVVHDKAFQRAIVMLPENIPNRWETMTHHVPGNWSPEDLKQRYEKLEHDLLMIVSGEVEFPELLNKVEPAEVHQGTLAVPDDWKKGTLWTLEEHRLFVRGLEKCGKGDWKGIATEFVVSRTPSEVASHAQKYFLRQNTTNDDRKRKSIHDITTGESDQTSVSLPRFNKKT* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0870 184 SUPERFAMILY Homeodomain-like 98 151 IPR009057 -
Lan13g0870 184 SUPERFAMILY Homeodomain-like 6 61 IPR009057 -
Lan13g0870 184 MobiDBLite consensus disorder prediction 154 184 - -
Lan13g0870 184 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 178 IPR043363 -
Lan13g0870 184 PANTHER TRANSCRIPTION FACTOR DIVARICATA-LIKE ISOFORM X1 7 178 - -
Lan13g0870 184 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Lan13g0870 184 Gene3D - 101 153 - -
Lan13g0870 184 SMART sant 10 63 IPR001005 -
Lan13g0870 184 SMART sant 99 149 IPR001005 -
Lan13g0870 184 MobiDBLite consensus disorder prediction 167 184 - -
Lan13g0870 184 Gene3D - 6 74 - -
Lan13g0870 184 CDD SANT 103 147 IPR001005 -
Lan13g0870 184 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Lan13g0870 184 Pfam Myb-like DNA-binding domain 103 147 IPR001005 -
Lan13g0870 184 ProSiteProfiles Myb-like domain profile. 103 147 IPR001005 -
Lan13g0870 184 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0870 Lan-Chr13 10471073 10472091 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan13g0870 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0870 - - lang:109332263 341.658