Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0860 ATGGATCTTGGGGTGGTGGGTTTTGATGGGTTGGTGGGTTCAAACACTACTACTACTACTACTACAAGTGATGATGGCTTTGTTTCTCTTGCTTTAGATCCTGAAACAAAGTACAAAGGGTATGGATCTGGTGGGTTTCTTAAGCAAGAGAGATCTAGCACTATTACTAATGAAGATGAATGGAGGAGTTCAAAAGTTGCAAAGACTCATGGTGACTTATTTGCTTCTTCTTCTTGTTCCAAACCAATGTTGCTTCAAGAAAGGGACTCTTTGTTGAGATCTAATAGTAGTAATAATAATAATGCCACTCTCTTTTGTGATGGACAACAAATGCTGAGTTTCTCTTCTCCTAAATCAGAAACTTCCTCAAATGCCACATTGCATTTTTCTTACCACCCTTATAGCAGGGATACAGGTTATAGTTCAGGAGGCATGCATGGGGCTATAACAGGGTCCAGAGGGTTATTCACTCCTTCTCAGTGGATGGAGTTGGAACACCAAGCCTTGATCTATAAGTACATAACAGCAAATGTGCCAGTTCCTTCACATCTTCTCTTCCCAATCAGAAAAGCTCTTGATTCTGCTGGCTTCTGTAACTTTTCAAATGGAGTTTTTAGATCCAATGCATTGGGATGGGGAGCTTTCCATCTCGGATTCTCAAACAGCACCGATCCTGAGCCAGGAAGGTGTCGTAGAACGGATGGGAAGAAATGGCGGTGCTCTAGAGATGCTGTTGTGGACCAAAAGTATTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAACAAGGTCAATTAGGCCATGCTGGCATCGCGACCACAACCGTTACAACTACAACTCCAAATGCCACTACTAATAACAACAATGGTTGTTCCTCATCACTGTCAAGTTTGATGCCCGTTAACTGTGCATCCAGTACCCTTACCATTGTGCCTCACCAGGAACATAAGAATACGCAGCATCCTCTGGCATCTAATACTTCTCCAGCCAACAGCATCAACAGGATTTTTATGAATAACAACGAAGAGAATAATGCAAGTGAGAGAATGCAAGATAGCCTTGCCATTCCAATGCTGCCTCCTACTCTAGAGCTGAGACCAAAAGAAAACATCCGTTTTATGATTCATAAACAGCAAATCCAATCATATGAAGAATCCACAAGGAATGATAATGAGTTTGGGCTTGTCACTTCTGATTCCCTACTTAACCCTTCTCAGAAAAGCTCAACCTTTCTCAATACCAAAACCTTCAGTCCTTCATCGCAAAACCAAGATACCGAACCGCAACATTCCCTTCGGCATTTCATTGATGACTGTCCCAATGATGACATGCAATCAGATCAAACACAACTATCCATTTCAATCCCAATGGCTGCTTCCTCAGATTTCATGTCATTCTCTTCCTCAACCACTAATGAAAAGCTCACATTGTCACCTTTAAGGCTCTCAAGGGAGTTAGATCCAATTCAAATGTGTTTGGGTGTTGGAAGTGGTATCAATGAATCAAATACAAGACAAGCTAATTGGGTTCCAATTACTTGGGAAAGTTGTTCTATGGGTGGTCCTCTTGGAGAAGTTCTCAATCTTAGTAATAACAATAATAATGCAAGTGAGCATTGTTCAAGAAACTCCTCTGCCCTAAACCTCATGACTGAAGGATGGGACAATAGTCCTCCAATAGGGTCATCATCTCCTACAGGGATTTTGCAGAAAACAGCATTTGGGTCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGAGCAGATAATAATAACAAGATTTAA 1800 0.4194 MDLGVVGFDGLVGSNTTTTTTTSDDGFVSLALDPETKYKGYGSGGFLKQERSSTITNEDEWRSSKVAKTHGDLFASSSCSKPMLLQERDSLLRSNSSNNNNATLFCDGQQMLSFSSPKSETSSNATLHFSYHPYSRDTGYSSGGMHGAITGSRGLFTPSQWMELEHQALIYKYITANVPVPSHLLFPIRKALDSAGFCNFSNGVFRSNALGWGAFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEQGQLGHAGIATTTVTTTTPNATTNNNNGCSSSLSSLMPVNCASSTLTIVPHQEHKNTQHPLASNTSPANSINRIFMNNNEENNASERMQDSLAIPMLPPTLELRPKENIRFMIHKQQIQSYEESTRNDNEFGLVTSDSLLNPSQKSSTFLNTKTFSPSSQNQDTEPQHSLRHFIDDCPNDDMQSDQTQLSISIPMAASSDFMSFSSSTTNEKLTLSPLRLSRELDPIQMCLGVGSGINESNTRQANWVPITWESCSMGGPLGEVLNLSNNNNNASEHCSRNSSALNLMTEGWDNSPPIGSSSPTGILQKTAFGSLSNSSAGSSPRADNNNKI* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0860 599 SMART QLQ_2 154 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan13g0860 599 ProSiteProfiles QLQ domain profile. 155 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan13g0860 599 ProSiteProfiles WRC domain profile. 224 268 IPR014977 -
Lan13g0860 599 Pfam QLQ 156 189 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan13g0860 599 PANTHER - 33 595 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan13g0860 599 PANTHER GROWTH-REGULATING FACTOR 9 33 595 - -
Lan13g0860 599 Pfam WRC 225 267 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0860 Lan-Chr13 10233755 10238194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0860 42 598 GRF Transcription Factor Family AT2G22840 42.382 9.09e-101 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan13g0860 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0860 - - gmx:100819396 654.825