Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0820 ATGGCTAATTTGATGACAGTGTTTCTTGTGATGGAAGTTATAGTGAGTGGTTTCAGATTTGGAGCATATGGGTTGAACATGAATTACTACTTGATGAGTTGTCCTTTAATGGAACTTGTTGTTAAGGACATTCTCAACAAAGCATTGCAGGATGATCCAACCTTAGCTGCTGGTCTTGTTAGAATGCACTTCCATGACTGTTTCATTGAGGGGTGTGATGGGTCAATTCTGATAGACTCCACTAAGGATAACACAGCAGAAAAGGATTCACCAGCAAATTTGAGCTTGAGAGGATATGAAGTGATAGATGAGATCAAAGAAAAACTTGAAAAACAATGCCCTGGAGTGGTTTCATGTGCTGATATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCTGGTGGACCAGTGTATGATATACCAAAAGGAAGAAAAGATGGAACAAGGTCCAAAATTCAGGACACTATCAATCTTCCATCCCCAACATTTAATGCTTCTGAGCTCATAAGGATGTTTGAGCAACATGGGTTTTCTGCACAAGAAATGGTGGCTCTCTCTGGGGCTCACACATTAGGAGTGGCAAGGTGTTCTTCTTTCAAGAACAGATTGACCCAAGTGGATAAAAGTACAACTTTGGACACAGAATTTGCAAAAACATTGGCCATAACATGCAGCTTTGGAGACAATGCTGAGCATCCTTTTGATGCCACAAGGAATGATTTTGATAACTTATACTACAACACTTTGGTCACCAACAATGGGCTTCTAACATCAGATCAAACATTGTATACTAACCCCAAAACAAGGAACATTGTGAACTCTTATGCACTCAACCAGGCCTTGTTTTTCTTGGACTTCCAACAGGCAATGGTGAAGATGAGCATGCTTGATGTTAAACAAGGTTCCAGGGGTGAAGTACGAGAAAATTGCCATAAAATAAACTGA 948 0.4019 MANLMTVFLVMEVIVSGFRFGAYGLNMNYYLMSCPLMELVVKDILNKALQDDPTLAAGLVRMHFHDCFIEGCDGSILIDSTKDNTAEKDSPANLSLRGYEVIDEIKEKLEKQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIQDTINLPSPTFNASELIRMFEQHGFSAQEMVALSGAHTLGVARCSSFKNRLTQVDKSTTLDTEFAKTLAITCSFGDNAEHPFDATRNDFDNLYYNTLVTNNGLLTSDQTLYTNPKTRNIVNSYALNQALFFLDFQQAMVKMSMLDVKQGSRGEVRENCHKIN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0820 315 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 Gene3D - 28 315 - -
Lan13g0820 315 Gene3D Peroxidase, domain 2 160 294 - -
Lan13g0820 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lan13g0820 315 CDD secretory_peroxidase 24 314 IPR033905 GO:0004601|GO:0042744
Lan13g0820 315 PANTHER PEROXIDASE 25-RELATED 15 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 Pfam Peroxidase 42 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 ProSiteProfiles Plant heme peroxidase family profile. 24 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan13g0820 315 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lan13g0820 315 PANTHER PEROXIDASE 47 15 313 - -
Lan13g0820 315 SUPERFAMILY Heme-dependent peroxidases 24 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0820 Lan-Chr13 8876576 8878751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0820 2 315 Peroxidase AT4G33420 71.656 3.37e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0820 K00430 - gmx:100809245 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0837 7 7601689 7603957 Lan13g0820 13 8876576 8878751 LSH
Lan13g0820 13 8876576 8878751 Lan20g0791 20 6840465 6844516 PCT
Lan20g0791 20 6840465 6844516 Lan13g0820 13 8876576 8878751 PCT