Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0808 ATGGCTGGTTCTCTTGGCATGTCAAAAATGCTTGGAAATCCCATCAACTTGAGTGGTGCAACAAGGGCAGTTCCATCACCCTCTAAATCTTCTAGTTTCAAGACTGTGGCTTTTTTCTCCAATTTTACCAAGAAGAAGGCAGCACCATCTCCAAAGCAGAAACCTTCTGCTGTTGTTTCCCCTGCTGATGATGAACTTGCCAAGTGGTATGGTCCTGACAGGAGGATCTTCTTGCCAGATGGTCTCTTGGACCGATCTGAAATCCCCGCATACTTGACCGGAGAAGTAGCAGGAGACTATGGTTATGACCCATTTGGTCTTGGGAAGAAGCCAGAGGACTTCGCCAAATACCAGGCATATGAGTTGATTCACGCCAGATGGGCAATGCTCGGTGCTGCCGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACAGGAGCTCTGCTTCTTGACGGAAACACATTGAACTACTTCGGCAAATCCATCCCCATCAATCTTGTTGTTGCTGTCATTGCTGAGGTTGTTCTTTTGGGTGGTGCAGAGTACTACAGAATCACGAATGGCCTGGATTTGGAAGACAAGCTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTAGCAAAGGATCCAGACCAAGCTGCAATACTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCAATGTTTGCTATGCTTGGTTTCTTCCTCCAAGCTTATATCACCGGAGAAGGTCCCGTTGAGAACCTTGCAAAACATCTCAGTGACCCCTTTGGAAACAACTTGCTCACTGTCATTGCTGGATCTGTTGAGAGGGTTCCAACTCTGTGA 864 0.4699 MAGSLGMSKMLGNPINLSGATRAVPSPSKSSSFKTVAFFSNFTKKKAAPSPKQKPSAVVSPADDELAKWYGPDRRIFLPDGLLDRSEIPAYLTGEVAGDYGYDPFGLGKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKSIPINLVVAVIAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFLQAYITGEGPVENLAKHLSDPFGNNLLTVIAGSVERVPTL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0808 287 Gene3D Chlorophyll a/b binding protein domain 76 287 - -
Lan13g0808 287 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 287 - -
Lan13g0808 287 Pfam Chlorophyll A-B binding protein 89 250 IPR022796 -
Lan13g0808 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 287 IPR001344 GO:0009765|GO:0016020
Lan13g0808 287 SUPERFAMILY Chlorophyll a-b binding protein 69 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0808 Lan-Chr13 8763808 8769508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0808 4 287 Chloroplast and Mitochondria Gene Families AT4G10340 80.351 1.09e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0808 K08916 - twl:120006908 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0857 7 7796104 7799634 Lan13g0808 13 8763808 8769508 LSH
Lan8g1148 8 15494455 15497274 Lan13g0808 13 8763808 8769508 LSH