Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0795 ATGCCATCCCGGCAACTCCTCCCATCGCCGCCGCAACACCACAACCACCACCTTCTCACCCCTATCCTCGCCGCCACACTCTGCTTCACCTCCCTCCTCCTCCTCTTCATCTTCTTTTACCTCCGCGCCAAAAAACCCACCACTCCACCACCTGACTCCAAACCCCCACACCGCTACTCTTACTCCCTCCTCCGCCGCGCCACCAACTCCTTCTCCACCCACTTAGGCCACGGTGGCTTCGGAACCGTCTACTCCGGCAATTTCCCAATCGGAAAATCCATCGCTGTAAAGCTCATGGACTCTTCATCCTACCAAGGCGAGCGCGAGTTCCATAACGAACTCTTCTTCGCTTCAAATCTCCATTCCCGATACATTGTCACAGCTTTTGGGTTTTCTTCTGACTCAAAACGACGTCGTTTTCTCTTAGTCTACGACCTCATGCAAAAGGGTAACCTTCAAGATGCGCTTTTGCACCGTAAGTGCCCTGAACTCATGGATTGGAAGAAGCGTTTCAATATTGTGTTGGATATAGCAAGAGGTGTTCAATACCTTCATTCTTGTGATCCACCAGTTATCCATGGTGATATAAAACCTAGTAATATTCTGCTTGATGGCGAGTTTTTCGCAAAAATCGGGGATTTCGGGCTTGCTCGGTTGAAATCGGAGCCCAATTTTGAGGTTTTTCATGGTGATGGTGTTGTTGAGGAGAAAAAGAAGGGAGAAGAAGGAGAAGAATTGGCATGTGAAGGTGGAATTGGGGTTGATGATTGTGGTGGATCAGTGATTGAGGAAACTGAGAGTGTGAATTGTGAGGAAGGGAGTTTGGGTTTGGAGCAATCTCCTGAAGGTTTTGTTAGGGTTCCTATATTGGAGACGTCGCCACAGACTATTGCTTCGCCAGAGACGGTTTTGGACAAGGTTAGCGTTAAGAGTGAGAAGAATGATGTTAAGAAGAATGGTAAATGGGTGAAGAGTAATTCAATGAGGGATTGGAAAGTGAAGGAACATGTGATGGAGTGGATTGGAAAGGAGGTGAACAAGGAAAAGCCGAAGAGTGAATGGTTTGGAGAACCAAAATTGGTAAAGGCAGAGAAGAAGAAGAGGAATGACCAATTGGAATGGTGGGAATCGATGGAGGAGGAAACAATTGATGCGGATTTGAAGAAGAAGAGAAGGCCAGTAAGGGAATGGTGGAAAGAGGAGCATAGTGAAGAGCTTGCAAGGAAGAAAAAGAAGAAGAAACATCAGACAAGGAATGGTGTTAATAGTGATGATTGGTGGGTAAGTGATGATGCTTTGAATGGAGATAAAAAGAAGAGGAATCGAAGAAGTAGAAACAATCGCGGTGGTGCGGATTTGGGGTTAGATGGACTGAGTGGTGATCCATGGAGAGCTCGCATGAATAGCTATGACTCTGCTGCTAGTGGAGAAATTCCAAAGAGTGGTGGTGTGAGTAGCACTCCTAGTATGAGGGGAACTGTTTGTTATGTTGCTCCGGAGTATGGATATGGTGGAGATGTCTCTGAGAAGTGTGATGTTTATAGTTTTGGGGTCTTGGTGCTTGTTGTCATTTCTGGTAGACGTCCACTTCAGGTGAATGGTTCACCAATGTCCGAGTTTCAGCGAGCAAATTTGTTGTCTTGGGCACGGTATTGTGCTAGGAAAGGCAAGCTCATTGAGCTGGTTGATCAATCTATTCAGTCATTGGATAAAGAGCAGGCACTTCTTTGCATCAAAGTGGTCCTGCTTTGTTTGCTTAAATCACCTGCTCGCCGCCCTTCAATGAAGGAAGTTCTGGGAATGCTTAGTGGGGAGTTGGAACCACCCCAAGTGCCGGTTGAGTACTCACCTTCGACCCCTTCTCGCTTCCCATTCAAGTCTCGGAATAAAGGCCGGTGA 1899 0.4692 MPSRQLLPSPPQHHNHHLLTPILAATLCFTSLLLLFIFFYLRAKKPTTPPPDSKPPHRYSYSLLRRATNSFSTHLGHGGFGTVYSGNFPIGKSIAVKLMDSSSYQGEREFHNELFFASNLHSRYIVTAFGFSSDSKRRRFLLVYDLMQKGNLQDALLHRKCPELMDWKKRFNIVLDIARGVQYLHSCDPPVIHGDIKPSNILLDGEFFAKIGDFGLARLKSEPNFEVFHGDGVVEEKKKGEEGEELACEGGIGVDDCGGSVIEETESVNCEEGSLGLEQSPEGFVRVPILETSPQTIASPETVLDKVSVKSEKNDVKKNGKWVKSNSMRDWKVKEHVMEWIGKEVNKEKPKSEWFGEPKLVKAEKKKRNDQLEWWESMEEETIDADLKKKRRPVREWWKEEHSEELARKKKKKKHQTRNGVNSDDWWVSDDALNGDKKKRNRRSRNNRGGADLGLDGLSGDPWRARMNSYDSAASGEIPKSGGVSSTPSMRGTVCYVAPEYGYGGDVSEKCDVYSFGVLVLVVISGRRPLQVNGSPMSEFQRANLLSWARYCARKGKLIELVDQSIQSLDKEQALLCIKVVLLCLLKSPARRPSMKEVLGMLSGELEPPQVPVEYSPSTPSRFPFKSRNKGR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0795 632 Coils Coil 399 419 - -
Lan13g0795 632 Gene3D Phosphorylase Kinase; domain 1 43 146 - -
Lan13g0795 632 ProSiteProfiles Protein kinase domain profile. 69 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0795 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lan13g0795 632 MobiDBLite consensus disorder prediction 607 632 - -
Lan13g0795 632 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 632 - -
Lan13g0795 632 Pfam Protein kinase domain 73 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0795 632 MobiDBLite consensus disorder prediction 398 458 - -
Lan13g0795 632 SMART serkin_6 69 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0795 632 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Lan13g0795 632 Gene3D Transferase(Phosphotransferase) domain 1 463 610 - -
Lan13g0795 632 Gene3D Transferase(Phosphotransferase) domain 1 147 237 - -
Lan13g0795 632 SUPERFAMILY Protein kinase-like (PK-like) 49 622 IPR011009 -
Lan13g0795 632 PANTHER OS07G0586332 PROTEIN 7 632 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0795 Lan-Chr13 8574509 8576800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0795 490 608 Receptor kinase-like Gene Family AT3G19300 37.500 4.34e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lan13g0795 Pkinase 3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0795 - - lja:Lj2g3v0473820.1 762.681