Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0793 ATGTTTCCTTTACAACGAGGCAAAGAGCTGGTGATCAAGTTTTCTAATAGCCCCCACCAACAACAACACCAAATCTCAGAAGATCTGATTCTGGATGATTGTGATTCCCATGGGATCAATGATTCTGATAAAATAATCACTAGTAACCAGCCAAAGAACCTAAATTATGGGGCTGAAAAGAGTACTCATGGTGATTGTCATGAACATTATATGAAGAAGATAGTTCATAGGGATATTGAGAGGCAAAGGAGGCAAGAAATGGCTACTCTTCATGCATCTCTTAGATCCCTTCTCCCTCTTGAGTTCATCAAGGGGAAGCGTTCAATATCTGACCACATGAACGAGGCAGTGAATTACATAAAGTACATGCAGGAGAATATCAAAGAACTTGGTGCCAAGAGAGATGAACTGAAGAAACTCTCAACTTCTAAGCTGGAAAACCATGCTACCAACCATGCTCATGGAAGCTTTACTATCCATGAGAACAATGGGATTGTGAGAATTGAAATTACCAGTTGCTCCATAGAGGAAAGATTCACACTTTCAAAGTTGCTGCAGTTACTTCTTGAAGAAGGACTTGAAGTAGTTAATTGTCTTTCAACTGAAGTCAATGGAAGATTGTTCCACAGTGTCCAGTGTGAGGTTAACAAGTCCAAAAGTGTAAATCTATCTGTGCTGAGAAGGAAAGTTGCTGATGTATTTCCATCCTATACATGTTGTGAATAA 726 0.3939 MFPLQRGKELVIKFSNSPHQQQHQISEDLILDDCDSHGINDSDKIITSNQPKNLNYGAEKSTHGDCHEHYMKKIVHRDIERQRRQEMATLHASLRSLLPLEFIKGKRSISDHMNEAVNYIKYMQENIKELGAKRDELKKLSTSKLENHATNHAHGSFTIHENNGIVRIEITSCSIEERFTLSKLLQLLLEEGLEVVNCLSTEVNGRLFHSVQCEVNKSKSVNLSVLRRKVADVFPSYTCCE* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0793 241 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lan13g0793 241 CDD bHLH_AtORG2_like 72 142 - -
Lan13g0793 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 137 IPR036638 GO:0046983
Lan13g0793 241 SMART finulus 77 129 IPR011598 GO:0046983
Lan13g0793 241 Coils Coil 120 140 - -
Lan13g0793 241 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 239 - -
Lan13g0793 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Lan13g0793 241 Gene3D - 64 152 IPR036638 GO:0046983
Lan13g0793 241 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 239 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0793 Lan-Chr13 8521048 8527160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0793 76 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 42.515 3.33e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan13g0793 HLH 5.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0793 - - gmx:100780888 291.967