Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0791 ATGTTTCCTTTACAACGAGGCAAAGAGCTGGTGATCAAGTTTTCTAATAGCCCCCACCAACAACAACACCAAATCTCAGAAGATCTGATTCTGGATGATTATGATTCCCTTGGTGTCAATGATTCTGATAAAATAATCACTAGTAACCAGCCAAAGAACCTAATTTATGGGGCTGAAAAGAGTGCTCCTGGTGATTCTAATGAACATATGAAGAAGATAGTTCATAGGGATATTGAGAGGCAAAGGAGGCAAGAAATGGCTACTCTTCATGCATCTCTTAGATCCCTTCTCCCTCTTGAGTTCATCCAGGGGAAGCGTTCAATATCTGACCACATGAACGAGGCAGTGAATTACATAAAGTACATGCAGGAGAATATCAAAGAACTTGGTGCCAAGAGAGATGAACTGAAGAAACTCTCAACTTCTAAGCTGGAAAACCATGCTACCAACCATGCTCATGGAAGCTTTACTATCCATGAGAACAATGGGATTGTGAGAATTGAAATTACCAGTTGCTCCATAGAGGAAAGATTCACACTTTCAAAGTTGCTGCAGTTACTTCTTGAAGAAGGACTTGAAGTAGTTAATTGTCTTTCAACTGAAGTCAATGGAAGATTGTTCCACAGTGTCCAGTGTGAGGTTAACAAGTCCAAAAGTGTAAATCTATCTGTGCTGAGAAGGAAAGTTGCTGATGTATTTCCATCCTATACATGTTGTGAATAA 723 0.397 MFPLQRGKELVIKFSNSPHQQQHQISEDLILDDYDSLGVNDSDKIITSNQPKNLIYGAEKSAPGDSNEHMKKIVHRDIERQRRQEMATLHASLRSLLPLEFIQGKRSISDHMNEAVNYIKYMQENIKELGAKRDELKKLSTSKLENHATNHAHGSFTIHENNGIVRIEITSCSIEERFTLSKLLQLLLEEGLEVVNCLSTEVNGRLFHSVQCEVNKSKSVNLSVLRRKVADVFPSYTCCE* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0791 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 137 IPR036638 GO:0046983
Lan13g0791 240 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 238 IPR015660 GO:0003700|GO:0006357
Lan13g0791 240 SMART finulus 76 128 IPR011598 GO:0046983
Lan13g0791 240 Gene3D - 63 152 IPR036638 GO:0046983
Lan13g0791 240 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 238 - -
Lan13g0791 240 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Lan13g0791 240 CDD bHLH_AtORG2_like 71 141 - -
Lan13g0791 240 Coils Coil 119 139 - -
Lan13g0791 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0791 Lan-Chr13 8446004 8447495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0791 60 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 46.784 8.81e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan13g0791 HLH 5.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0791 - - gmx:100780888 301.982